Conservation of cofitness between ECD_02634 and ECD_01698 in Escherichia coli BL21

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02634 putative D-glucarate transporter 1.0 ECD_01698 putative transporter 0.44 15
Escherichia coli ECOR38 1.00 HEPCGN_19475 gudP galactarate/glucarate/glycerate transporter GudP 1.00 HEPCGN_05370 tcyP cystine/sulfocysteine:cation symporter low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00942 putative glucarate transporter 1.00 OHPLBJKB_02004 L-cystine uptake protein TcyP low > 73
Escherichia fergusonii Becca 1.00 EFB2_01128 putative glucarate transporter 0.99 EFB2_02263 L-cystine uptake protein TcyP low > 86
Escherichia coli ECRC62 1.00 BNILDI_10605 gudP galactarate/glucarate/glycerate transporter GudP 0.99 BNILDI_16310 tcyP cystine/sulfocysteine:cation symporter low > 75
Escherichia coli ECOR27 1.00 NOLOHH_12100 gudP galactarate/glucarate/glycerate transporter GudP 1.00 NOLOHH_17525 tcyP cystine/sulfocysteine:cation symporter low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS15540 galactarate/glucarate/glycerate transporter GudP 0.99 ECOLIN_RS09650 cystine/sulfocysteine:cation symporter low > 55
Escherichia coli BW25113 1.00 b2789 gudP predicted D-glucarate transporter (NCBI) 1.00 b1729 ydjN predicted transporter (NCBI) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_17990 gudP galactarate/glucarate/glycerate transporter GudP 0.99 NIAGMN_01060 tcyP cystine/sulfocysteine:cation symporter — —
Escherichia coli ECRC99 1.00 KEDOAH_07910 gudP galactarate/glucarate/glycerate transporter GudP 1.00 KEDOAH_01105 tcyP cystine/sulfocysteine:cation symporter — —
Escherichia coli ECRC100 1.00 OKFHMN_20220 gudP galactarate/glucarate/glycerate transporter GudP 1.00 OKFHMN_27005 tcyP cystine/sulfocysteine:cation symporter low > 80
Escherichia coli ECRC101 1.00 MCAODC_10745 gudP galactarate/glucarate/glycerate transporter GudP 1.00 MCAODC_18405 tcyP cystine/sulfocysteine:cation symporter low > 87
Escherichia coli ECRC98 1.00 JDDGAC_23885 gudP galactarate/glucarate/glycerate transporter GudP 1.00 JDDGAC_01580 tcyP cystine/sulfocysteine:cation symporter low > 86
Klebsiella michiganensis M5al 0.98 BWI76_RS22835 MFS transporter 0.89 BWI76_RS11765 bifunctional transporter/kinase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4843 D-glucarate permease 0.92 GFF3510 L-cystine uptake protein TcyP low > 78
Enterobacter asburiae PDN3 0.94 EX28DRAFT_2870 D-galactonate transporter 0.90 EX28DRAFT_1734 Predicted Na+/dicarboxylate symporter low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_03659 putative glucarate transporter 0.90 MPMX20_01884 L-cystine uptake protein TcyP low > 85
Rahnella sp. WP5 0.87 EX31_RS03160 MFS transporter 0.82 EX31_RS14120 L-cystine transporter low > 89
Erwinia tracheiphila SCR3 0.85 LU632_RS06310 MFS transporter 0.79 LU632_RS10855 L-cystine transporter low > 74
Pectobacterium carotovorum WPP14 0.84 HER17_RS04075 MFS transporter 0.75 HER17_RS11455 L-cystine transporter low > 75
Pantoea sp. MT58 0.83 IAI47_04080 MFS transporter 0.80 IAI47_11030 L-cystine transporter low > 76
Dickeya dadantii 3937 0.83 DDA3937_RS17055 MFS transporter 0.80 DDA3937_RS11380 L-cystine transporter low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS17110 MFS transporter 0.77 HGI48_RS11420 L-cystine transporter low > 71
Dickeya dianthicola ME23 0.82 DZA65_RS18185 MFS transporter 0.76 DZA65_RS11765 L-cystine transporter low > 75
Pseudomonas putida KT2440 0.69 PP_3600 glucarate transporter 0.71 PP_5131 sodium-cystine symporter low > 96
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS04245 MFS transporter 0.78 PFLU_RS28560 L-cystine transporter low > 109
Pseudomonas fluorescens SBW25 0.69 PFLU_RS04245 MFS transporter 0.78 PFLU_RS28560 L-cystine transporter low > 109
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_3297 D-galactarate permease 0.73 Pf6N2E2_4562 L-cystine uptake protein TcyP low > 103
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_05295 glucarate transporter 0.76 AO353_08365 L-cystine transporter tcyP low > 101
Pseudomonas sp. RS175 0.69 PFR28_00144 putative glucarate transporter 0.75 PFR28_04280 L-cystine uptake protein TcyP low > 88
Pseudomonas simiae WCS417 0.68 PS417_04205 D-galacturonate transporter (MFS superfamily) (from data) 0.78 PS417_26900 L-cystine transporter tcyP low > 88
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_07175 glucarate transporter 0.75 AO356_13240 L-cystine transporter tcyP low > 104
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_5043 D-galactarate permease 0.76 PfGW456L13_970 L-cystine uptake protein TcyP low > 87
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS20330 MFS transporter 0.74 ABZR87_RS12075 L-cystine transporter 0.28 57
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_1108 D-galactarate permease 0.77 Pf1N1B4_2301 L-cystine uptake protein TcyP low > 87
Serratia liquefaciens MT49 0.35 IAI46_16925 MFS transporter 0.85 IAI46_10840 L-cystine transporter low > 86

Not shown: 15 genomes with orthologs for ECD_02634 only; 5 genomes with orthologs for ECD_01698 only