Conservation of cofitness between ECD_01126 and ECD_01698 in Escherichia coli BL21

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 1.0 ECD_01698 putative transporter 0.46 9
Escherichia fergusonii Becca 1.00 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.99 EFB2_02263 L-cystine uptake protein TcyP low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.99 ECOLIN_RS09650 cystine/sulfocysteine:cation symporter — —
Escherichia coli ECOR27 1.00 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 1.00 NOLOHH_17525 tcyP cystine/sulfocysteine:cation symporter low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 1.00 OHPLBJKB_02004 L-cystine uptake protein TcyP low > 73
Escherichia coli ECOR38 1.00 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 1.00 HEPCGN_05370 tcyP cystine/sulfocysteine:cation symporter low > 85
Escherichia coli ECRC102 1.00 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.99 NIAGMN_01060 tcyP cystine/sulfocysteine:cation symporter — —
Escherichia coli ECRC99 1.00 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 1.00 KEDOAH_01105 tcyP cystine/sulfocysteine:cation symporter — —
Escherichia coli ECRC101 1.00 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 1.00 MCAODC_18405 tcyP cystine/sulfocysteine:cation symporter — —
Escherichia coli ECRC98 1.00 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 1.00 JDDGAC_01580 tcyP cystine/sulfocysteine:cation symporter — —
Escherichia coli ECRC62 1.00 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.99 BNILDI_16310 tcyP cystine/sulfocysteine:cation symporter — —
Escherichia coli ECRC101 1.00 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 1.00 OKFHMN_27005 tcyP cystine/sulfocysteine:cation symporter — —
Escherichia coli BW25113 1.00 b1128 ycfD orf, hypothetical protein (VIMSS) 1.00 b1729 ydjN predicted transporter (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF3413 FIG002776: hypothetical protein 0.92 GFF3510 L-cystine uptake protein TcyP low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_1802 Uncharacterized conserved protein 0.90 EX28DRAFT_1734 Predicted Na+/dicarboxylate symporter low > 76
Enterobacter sp. TBS_079 0.89 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.90 MPMX20_01884 L-cystine uptake protein TcyP low > 85
Klebsiella michiganensis M5al 0.88 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase 0.89 BWI76_RS11765 bifunctional transporter/kinase — —
Erwinia tracheiphila SCR3 0.82 LU632_RS14600 cupin domain-containing protein 0.79 LU632_RS10855 L-cystine transporter low > 74
Serratia liquefaciens MT49 0.81 IAI46_10385 cupin domain-containing protein 0.85 IAI46_10840 L-cystine transporter low > 86
Dickeya dianthicola ME23 0.80 DZA65_RS11890 cupin domain-containing protein 0.76 DZA65_RS11765 L-cystine transporter low > 75
Dickeya dianthicola 67-19 0.80 HGI48_RS11555 cupin domain-containing protein 0.77 HGI48_RS11420 L-cystine transporter low > 71
Pectobacterium carotovorum WPP14 0.80 HER17_RS11650 cupin domain-containing protein 0.75 HER17_RS11455 L-cystine transporter low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS11510 cupin domain-containing protein 0.80 DDA3937_RS11380 L-cystine transporter low > 74
Rahnella sp. WP5 0.79 EX31_RS24550 cupin domain-containing protein 0.82 EX31_RS14120 L-cystine transporter low > 89
Pantoea sp. MT58 0.79 IAI47_11940 cupin domain-containing protein 0.80 IAI47_11030 L-cystine transporter low > 76
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_2636 FIG002776: hypothetical protein 0.76 PfGW456L13_970 L-cystine uptake protein TcyP low > 87
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_27720 cupin 0.76 AO353_08365 L-cystine transporter tcyP low > 101
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_4045 FIG002776: hypothetical protein 0.77 Pf1N1B4_2301 L-cystine uptake protein TcyP — —
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_22095 cupin 0.75 AO356_13240 L-cystine transporter tcyP low > 104
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_283 FIG002776: hypothetical protein 0.73 Pf6N2E2_4562 L-cystine uptake protein TcyP — —
Pseudomonas putida KT2440 0.33 PP_4017 conserved protein of unknown function 0.71 PP_5131 sodium-cystine symporter — —
Pseudomonas sp. RS175 0.33 PFR28_02622 50S ribosomal protein L16 3-hydroxylase 0.75 PFR28_04280 L-cystine uptake protein TcyP — —
Pseudomonas fluorescens SBW25 0.32 PFLU_RS18595 cupin domain-containing protein 0.78 PFLU_RS28560 L-cystine transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS18595 cupin domain-containing protein 0.78 PFLU_RS28560 L-cystine transporter low > 109
Pseudomonas simiae WCS417 0.32 PS417_16555 cupin 0.78 PS417_26900 L-cystine transporter tcyP low > 88
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS10565 cupin domain-containing protein 0.74 ABZR87_RS12075 L-cystine transporter low > 80
Acinetobacter radioresistens SK82 0.22 MPMX26_01736 putative ribosomal oxygenase 0.79 MPMX26_01015 L-cystine uptake protein TcyP low > 36

Not shown: 26 genomes with orthologs for ECD_01126 only; 4 genomes with orthologs for ECD_01698 only