Conservation of cofitness between ECD_02776 and ECD_01489 in Escherichia coli BL21

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02776 16S rRNA m(3)U1498 methyltransferase, SAM-dependent 1.0 ECD_01489 transcriptional repressor of multiple antibiotic resistance 0.77 6
Escherichia coli ECOR38 1.00 HEPCGN_18585 Ribosomal RNA small subunit methyltransferase E 0.98 HEPCGN_26840 marR multiple antibiotic resistance transcriptional regulator MarR low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS16390 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.98 ECOLIN_RS08730 multiple antibiotic resistance transcriptional regulator MarR low > 55
Escherichia coli BW25113 1.00 b2946 yggJ orf, hypothetical protein (VIMSS) 1.00 b1530 marR multiple antibiotic resistance protein; repressor of mar operon (VIMSS) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_22910 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.98 JDDGAC_03590 marR multiple antibiotic resistance transcriptional regulator MarR low > 86
Escherichia coli ECRC99 1.00 KEDOAH_08860 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.98 KEDOAH_27350 marR multiple antibiotic resistance transcriptional regulator MarR — —
Escherichia fergusonii Becca 1.00 EFB2_00956 Ribosomal RNA small subunit methyltransferase E 0.98 EFB2_02431 Multiple antibiotic resistance protein MarR low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00772 Ribosomal RNA small subunit methyltransferase E 0.98 OHPLBJKB_02189 Multiple antibiotic resistance protein MarR low > 73
Escherichia coli ECOR27 1.00 NOLOHH_11150 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.98 NOLOHH_18725 marR multiple antibiotic resistance transcriptional regulator MarR low > 75
Escherichia coli ECRC100 1.00 OKFHMN_19280 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.98 OKFHMN_01080 marR multiple antibiotic resistance transcriptional regulator MarR low > 80
Escherichia coli ECRC102 1.00 NIAGMN_17045 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.98 NIAGMN_25225 marR multiple antibiotic resistance transcriptional regulator MarR — —
Escherichia coli ECRC101 1.00 MCAODC_09800 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.98 MCAODC_16845 marR multiple antibiotic resistance transcriptional regulator MarR low > 87
Escherichia coli ECRC62 1.00 BNILDI_09730 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.98 BNILDI_17215 marR multiple antibiotic resistance transcriptional regulator MarR low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF3048 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.80 GFF2507 Multiple antibiotic resistance protein MarR low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2984 RNA methyltransferase, RsmE family 0.91 EX28DRAFT_1205 Transcriptional regulators low > 76
Enterobacter sp. TBS_079 0.89 MPMX20_03804 Ribosomal RNA small subunit methyltransferase E 0.92 MPMX20_02260 Multiple antibiotic resistance protein MarR low > 85
Klebsiella michiganensis M5al 0.86 BWI76_RS24070 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.85 BWI76_RS15290 transcriptional regulator low > 92
Dickeya dadantii 3937 0.81 DDA3937_RS18555 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.38 DDA3937_RS07305 MarR family transcriptional regulator low > 74
Dickeya dianthicola 67-19 0.79 HGI48_RS18490 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.34 HGI48_RS08125 MarR family transcriptional regulator low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS19625 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.35 DZA65_RS08720 MarR family transcriptional regulator low > 75
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_08050 16S rRNA methyltransferase 0.29 AO353_27855 MarR family transcriptional regulator low > 101
Pseudomonas fluorescens SBW25 0.42 PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.28 PFLU_RS18910 MarR family transcriptional regulator low > 109
Pseudomonas sp. RS175 0.42 PFR28_04209 Ribosomal RNA small subunit methyltransferase E 0.31 PFR28_02750 Multiple antibiotic resistance protein MarR low > 88
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.28 PFLU_RS18910 MarR family transcriptional regulator low > 109
Pseudomonas putida KT2440 0.41 PP_4985 16S rRNA m3U1498 methyltransferase 0.24 PP_3550 putative Transcriptional regulator EmrR — —
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_13565 16S rRNA methyltransferase 0.32 AO356_01040 MarR family transcriptional regulator — —
Pseudomonas simiae WCS417 0.41 PS417_26545 16S rRNA methyltransferase 0.28 PS417_16925 MarR family transcriptional regulator — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_1043 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.29 PfGW456L13_2603 Transcriptional regulator, MarR family low > 87
Ralstonia solanacearum UW163 0.34 UW163_RS07745 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.26 UW163_RS05750 MarR family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS05880 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.26 RALBFv3_RS07875 MarR family transcriptional regulator 0.39 29
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS16855 16S rRNA methyltransferase 0.28 BPHYT_RS10020 MFS transporter — —
Ralstonia solanacearum PSI07 0.34 RPSI07_RS11365 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.28 RPSI07_RS09405 MarR family transcriptional regulator low > 81
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_11035 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.18 OKGIIK_00775 MarR family transcriptional regulator low > 52
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_06311 16S rRNA (uracil1498-N3)-methyltransferase 0.24 H281DRAFT_01552 DNA-binding transcriptional regulator, MarR family — —
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS01505 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.28 ABZR87_RS03545 MarR family transcriptional regulator low > 80
Ralstonia solanacearum GMI1000 0.33 RS_RS13825 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.27 RS_RS15770 MarR family transcriptional regulator low > 80
Agrobacterium fabrum C58 0.17 Atu0657 hypothetical protein 0.22 Atu0272 transcriptional regulator, MarR family low > 89
Brevundimonas sp. GW460-12-10-14-LB2 0.13 A4249_RS00350 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.21 A4249_RS02930 MarR family transcriptional regulator — —

Not shown: 62 genomes with orthologs for ECD_02776 only; 0 genomes with orthologs for ECD_01489 only