| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_01082 | | 23S rRNA pseudouridine(955,2504,2580) synthase | 1.0 | ECD_01489 | | transcriptional repressor of multiple antibiotic resistance | 0.81 | 5 |
| Escherichia coli BW25113 | 1.00 | b1086 | rluC | 23S rRNA pseudouridylate synthase (NCBI) | 1.00 | b1530 | marR | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_02580 | | Ribosomal large subunit pseudouridine synthase C | 0.98 | OHPLBJKB_02189 | | Multiple antibiotic resistance protein MarR | low | > 73 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_21145 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.98 | NOLOHH_18725 | marR | multiple antibiotic resistance transcriptional regulator MarR | low | > 75 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_19305 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.98 | BNILDI_17215 | marR | multiple antibiotic resistance transcriptional regulator MarR | low | > 75 |
| Escherichia fergusonii Becca | 1.00 | EFB2_02889 | | Ribosomal large subunit pseudouridine synthase C | 0.98 | EFB2_02431 | | Multiple antibiotic resistance protein MarR | low | > 86 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_23865 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.98 | HEPCGN_26840 | marR | multiple antibiotic resistance transcriptional regulator MarR | low | > 87 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_24140 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.98 | KEDOAH_27350 | marR | multiple antibiotic resistance transcriptional regulator MarR | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_22975 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.98 | MCAODC_16845 | marR | multiple antibiotic resistance transcriptional regulator MarR | low | > 87 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_24215 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.98 | NIAGMN_25225 | marR | multiple antibiotic resistance transcriptional regulator MarR | — | — |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_03615 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.98 | OKFHMN_01080 | marR | multiple antibiotic resistance transcriptional regulator MarR | low | > 80 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_07275 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.98 | JDDGAC_03590 | marR | multiple antibiotic resistance transcriptional regulator MarR | low | > 86 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS06280 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.98 | ECOLIN_RS08730 | | multiple antibiotic resistance transcriptional regulator MarR | low | > 55 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.98 | GFF3366 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | 0.80 | GFF2507 | | Multiple antibiotic resistance protein MarR | low | > 78 |
| Klebsiella michiganensis M5al | 0.93 | BWI76_RS11050 | | 23S rRNA pseudouridine(955/2504/2580) synthase | 0.85 | BWI76_RS15290 | | transcriptional regulator | low | > 92 |
| Enterobacter asburiae PDN3 | 0.92 | EX28DRAFT_1844 | | pseudouridine synthase, RluA family | 0.91 | EX28DRAFT_1205 | | Transcriptional regulators | low | > 76 |
| Enterobacter sp. TBS_079 | 0.89 | MPMX20_01766 | | Ribosomal large subunit pseudouridine synthase C | 0.92 | MPMX20_02260 | | Multiple antibiotic resistance protein MarR | low | > 85 |
| Dickeya dadantii 3937 | 0.80 | DDA3937_RS13155 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.38 | DDA3937_RS07305 | | MarR family transcriptional regulator | low | > 74 |
| Dickeya dianthicola 67-19 | 0.80 | HGI48_RS13220 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.34 | HGI48_RS08125 | | MarR family transcriptional regulator | low | > 71 |
| Dickeya dianthicola ME23 | 0.80 | DZA65_RS13690 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.35 | DZA65_RS08720 | | MarR family transcriptional regulator | low | > 75 |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_20125 | | 23S rRNA pseudouridylate synthase | 0.32 | AO356_01040 | | MarR family transcriptional regulator | — | — |
| Pseudomonas sp. RS175 | 0.55 | PFR28_03018 | | Ribosomal large subunit pseudouridine synthase C | 0.31 | PFR28_02750 | | Multiple antibiotic resistance protein MarR | low | > 88 |
| Pseudomonas putida KT2440 | 0.55 | PP_1906 | | ribosomal large subunit pseudouridine synthase C | 0.24 | PP_3550 | | putative Transcriptional regulator EmrR | — | — |
| Pseudomonas simiae WCS417 | 0.54 | PS417_21480 | | 23S rRNA pseudouridylate synthase | 0.28 | PS417_16925 | | MarR family transcriptional regulator | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.54 | PFLU_RS23095 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.28 | PFLU_RS18910 | | MarR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.54 | PFLU_RS23095 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.28 | PFLU_RS18910 | | MarR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.53 | AO353_01405 | | 23S rRNA pseudouridylate synthase | 0.29 | AO353_27855 | | MarR family transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.51 | PfGW456L13_2097 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | 0.29 | PfGW456L13_2603 | | Transcriptional regulator, MarR family | low | > 87 |
| Ralstonia solanacearum IBSBF1503 | 0.47 | RALBFv3_RS14375 | | RluA family pseudouridine synthase | 0.26 | RALBFv3_RS07875 | | MarR family transcriptional regulator | low | > 76 |
| Ralstonia solanacearum UW163 | 0.47 | UW163_RS11840 | | RluA family pseudouridine synthase | 0.26 | UW163_RS05750 | | MarR family transcriptional regulator | — | — |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS05155 | | RluA family pseudouridine synthase | 0.27 | RS_RS15770 | | MarR family transcriptional regulator | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS14480 | | ribosomal large subunit pseudouridine synthase C | 0.28 | BPHYT_RS10020 | | MFS transporter | — | — |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS19085 | | RluA family pseudouridine synthase | 0.28 | RPSI07_RS09405 | | MarR family transcriptional regulator | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS10090 | | RluA family pseudouridine synthase | 0.28 | ABZR87_RS03545 | | MarR family transcriptional regulator | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.46 | H281DRAFT_04340 | | 23S rRNA pseudouridine955/2504/2580 synthase | 0.24 | H281DRAFT_01552 | | DNA-binding transcriptional regulator, MarR family | — | — |
| Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_07405 | rluA | 23S rRNA pseudouridine(955/2504/2580) synthase | 0.18 | OKGIIK_00775 | | MarR family transcriptional regulator | low | > 52 |
| Agrobacterium fabrum C58 | 0.26 | Atu1471 | | ribosomal large subunit pseudouridine synthase C | 0.22 | Atu0272 | | transcriptional regulator, MarR family | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.25 | A4249_RS07865 | | RluA family pseudouridine synthase | 0.21 | A4249_RS02930 | | MarR family transcriptional regulator | low | > 48 |