Conservation of cofitness between ECD_02588 and ECD_01276 in Escherichia coli BL21

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02588 putative class II aldolase 1.0 ECD_01276 repressor for the divergent puu operons, putrescine inducible 0.44 23
Escherichia coli BW25113 1.00 b2738 ygbL hypothetical protein (NCBI) 1.00 b1299 puuR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00995 3-oxo-tetronate 4-phosphate decarboxylase 1.00 OHPLBJKB_02383 HTH-type transcriptional regulator PuuR low > 73
Escherichia coli ECOR27 1.00 NOLOHH_12345 otnC aldolase 1.00 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR low > 75
Escherichia coli ECRC62 1.00 BNILDI_10895 otnC aldolase 1.00 BNILDI_18270 puuR HTH-type transcriptional regulator PuuR low > 75
Pantoea sp. MT58 0.75 IAI47_07150 aldolase 0.71 IAI47_07115 HTH-type transcriptional regulator PuuR low > 76
Serratia liquefaciens MT49 0.73 IAI46_07595 aldolase 0.86 IAI46_10550 HTH-type transcriptional regulator PuuR 0.34 71
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS10970 aldolase 0.21 RR42_RS00225 XRE family transcriptional regulator low > 128
Sinorhizobium meliloti 1021 0.45 SM_b20666 aldolase 0.29 SMc04387 aldehyde dehydrogenase low > 103
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS05255 aldolase 0.14 ABZR87_RS06145 XRE family transcriptional regulator low > 80
Paraburkholderia graminis OAS925 0.40 ABIE53_005173 ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase 0.18 ABIE53_004168 transcriptional regulator with XRE-family HTH domain low > 113
Pseudomonas fluorescens SBW25 0.39 PFLU_RS11560 aldolase 0.36 PFLU_RS29365 cupin domain-containing protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_5075 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 0.36 Pf1N1B4_2147 Putrescine utilization regulator — —
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS11560 aldolase 0.36 PFLU_RS29365 cupin domain-containing protein low > 109
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS17920 aldolase 0.33 QEN71_RS12920 cupin domain-containing protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_01508 Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase 0.19 H281DRAFT_03130 transcriptional regulator, XRE family with cupin sensor low > 103
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_0464 hypothetical protein 0.37 Psyr_0238 Helix-turn-helix motif protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_0464 hypothetical protein 0.37 Psyr_0238 Helix-turn-helix motif protein low > 86
Rhodospirillum rubrum S1H 0.38 Rru_A3143 Class II aldolase/adducin-like (NCBI) 0.30 Rru_A2042 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) low > 58
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS29405 aldolase 0.35 BPHYT_RS23170 XRE family transcriptional regulator — —
Variovorax sp. OAS795 0.31 ABID97_RS01930 aldolase 0.15 ABID97_RS13245 XRE family transcriptional regulator low > 91
Escherichia coli ECRC99 0.19 KEDOAH_07970 fucA L-fuculose-phosphate aldolase 1.00 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR — —
Escherichia coli ECRC98 0.19 JDDGAC_23825 fucA L-fuculose-phosphate aldolase 1.00 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR low > 86
Escherichia coli ECOR38 0.19 HEPCGN_19415 fucA L-fuculose-phosphate aldolase 1.00 HEPCGN_25765 puuR HTH-type transcriptional regulator PuuR low > 87
Escherichia coli ECRC100 0.19 OKFHMN_20160 fucA L-fuculose-phosphate aldolase 1.00 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR low > 80
Escherichia coli ECRC102 0.19 NIAGMN_17930 fucA L-fuculose-phosphate aldolase 1.00 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR — —
Escherichia coli ECRC101 0.19 MCAODC_10685 fucA L-fuculose-phosphate aldolase 1.00 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR low > 87
Pseudomonas sp. S08-1 0.15 OH686_15590 ase-related protein 0.37 OH686_13700 Putrescine utilization regulator low > 80

Not shown: 14 genomes with orthologs for ECD_02588 only; 22 genomes with orthologs for ECD_01276 only