Conservation of cofitness between ECD_03418 and ECD_00705 in Escherichia coli BL21

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03418 D-xylose transporter subunit 1.0 ECD_00705 zinc efflux system 0.69 4
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00138 D-xylose-binding periplasmic protein 1.00 OHPLBJKB_02961 Zinc transporter ZitB low > 73
Escherichia coli BW25113 1.00 b3566 xylF D-xylose transporter subunit (NCBI) 1.00 b0752 zitB zinc transporter ZitB (NCBI) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_13710 xylF D-xylose ABC transporter substrate-binding protein 1.00 NIAGMN_04800 zitB CDF family zinc transporter ZitB — —
Escherichia coli ECRC99 1.00 KEDOAH_12200 xylF D-xylose ABC transporter substrate-binding protein 1.00 KEDOAH_21215 zitB CDF family zinc transporter ZitB — —
Escherichia coli ECRC100 1.00 OKFHMN_15950 xylF D-xylose ABC transporter substrate-binding protein 1.00 OKFHMN_06750 zitB CDF family zinc transporter ZitB low > 80
Escherichia coli ECRC98 1.00 JDDGAC_19580 xylF D-xylose ABC transporter substrate-binding protein 1.00 JDDGAC_10405 zitB CDF family zinc transporter ZitB low > 86
Escherichia coli ECRC101 1.00 MCAODC_06465 xylF D-xylose ABC transporter substrate-binding protein 1.00 MCAODC_25970 zitB CDF family zinc transporter ZitB low > 87
Escherichia coli ECOR27 1.00 NOLOHH_07895 xylF D-xylose ABC transporter substrate-binding protein 1.00 NOLOHH_23180 zitB CDF family zinc transporter ZitB low > 75
Escherichia coli ECOR38 1.00 HEPCGN_14835 xylF D-xylose ABC transporter substrate-binding protein 1.00 HEPCGN_01525 zitB CDF family zinc transporter ZitB low > 87
Escherichia coli ECRC62 1.00 BNILDI_03650 xylF D-xylose ABC transporter substrate-binding protein 1.00 BNILDI_21175 zitB CDF family zinc transporter ZitB low > 75
Escherichia fergusonii Becca 1.00 EFB2_00241 D-xylose-binding periplasmic protein 1.00 EFB2_03354 Zinc transporter ZitB low > 86
Klebsiella michiganensis M5al 0.91 BWI76_RS27030 D-xylose transporter subunit XylF 0.71 BWI76_RS08590 zinc transporter ZitB low > 92
Enterobacter sp. TBS_079 0.89 MPMX20_00164 D-xylose-binding periplasmic protein 0.76 MPMX20_01379 Zinc transporter ZitB low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_3831 D-xylose ABC transporter, substrate-binding protein 0.74 EX28DRAFT_2243 cation diffusion facilitator family transporter low > 76
Rahnella sp. WP5 0.84 EX31_RS09760 D-xylose ABC transporter substrate-binding protein 0.63 EX31_RS23535 CDF family zinc transporter ZitB low > 89
Pantoea sp. MT58 0.83 IAI47_00190 D-xylose ABC transporter substrate-binding protein 0.63 IAI47_13625 CDF family zinc transporter ZitB low > 76
Serratia liquefaciens MT49 0.82 IAI46_00285 D-xylose ABC transporter substrate-binding protein 0.62 IAI46_06390 CDF family zinc transporter ZitB low > 86
Dickeya dadantii 3937 0.82 DDA3937_RS20930 D-xylose ABC transporter substrate-binding protein 0.65 DDA3937_RS06555 CDF family zinc transporter ZitB low > 74
Pectobacterium carotovorum WPP14 0.79 HER17_RS21080 D-xylose ABC transporter substrate-binding protein 0.59 HER17_RS14810 CDF family zinc transporter ZitB low > 75
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS22460 xylose ABC transporter substrate-binding protein 0.16 HSERO_RS10100 cation transporter low > 78
Dyella japonica UNC79MFTsu3.2 0.61 ABZR86_RS14420 D-xylose ABC transporter substrate-binding protein 0.30 ABZR86_RS07885 cation diffusion facilitator family transporter low > 74
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein 0.30 PFLU_RS03455 cation transporter low > 109
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2884 xylose-binding protein 0.16 Psyr_1506 Cation efflux protein low > 86
Pseudomonas fluorescens SBW25 0.59 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein 0.30 PFLU_RS03455 cation transporter low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2884 xylose-binding protein 0.16 Psyr_1506 Cation efflux protein low > 86
Variovorax sp. SCN45 0.38 GFF5603 D-xylose ABC transporter, substrate-binding protein XylF 0.33 GFF4691 Cobalt/zinc/cadmium resistance protein CzcD low > 127
Sinorhizobium meliloti 1021 0.37 SM_b20902 sugar uptake ABC transporter substrate-binding protein precursor 0.18 SMc04167 histidine-rich transporter transmembrane protein low > 103
Dinoroseobacter shibae DFL-12 0.36 Dshi_2000 xylitol ABC transporter, periplasmic substrate-binding protein (from data) 0.22 Dshi_3964 cation diffusion facilitator family transporter (RefSeq) — —
Azospirillum sp. SherDot2 0.30 MPMX19_03028 D-xylose-binding periplasmic protein 0.28 MPMX19_06384 Cadmium, cobalt and zinc/H(+)-K(+) antiporter low > 112
Azospirillum brasilense Sp245 0.27 AZOBR_RS31240 sugar ABC transporter substrate-binding protein 0.40 AZOBR_RS26670 zinc transporter ZitB low > 97

Not shown: 21 genomes with orthologs for ECD_03418 only; 32 genomes with orthologs for ECD_00705 only