Conservation of cofitness between ECD_01634 and ECD_00358 in Escherichia coli BL21

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01634 multidrug efflux system transporter 1.0 ECD_00358 HNH nuclease family protein 0.56 17
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02061 Multidrug resistance protein MdtK 1.00 OHPLBJKB_03266 hypothetical protein low > 73
Escherichia fergusonii Becca 1.00 EFB2_02329 Multidrug resistance protein MdtK 1.00 EFB2_03647 hypothetical protein low > 86
Escherichia coli BW25113 1.00 b1663 mdtK multidrug efflux protein NorM (NCBI) 1.00 b0410 yajD hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS09270 multidrug efflux MATE transporter MdtK 1.00 ECOLIN_RS02485 HNH nuclease YajD — —
Escherichia coli ECOR27 1.00 NOLOHH_17880 mdtK multidrug efflux MATE transporter MdtK 1.00 NOLOHH_01420 yajD HNH nuclease YajD — —
Escherichia coli ECRC62 1.00 BNILDI_16670 mdtK multidrug efflux MATE transporter MdtK 1.00 BNILDI_22835 yajD HNH nuclease YajD — —
Escherichia coli ECOR38 1.00 HEPCGN_05745 mdtK multidrug efflux MATE transporter MdtK 1.00 HEPCGN_07115 yajD HNH nuclease YajD low > 85
Escherichia coli ECRC101 1.00 OKFHMN_27360 mdtK multidrug efflux MATE transporter MdtK 1.00 OKFHMN_08475 yajD HNH nuclease YajD — —
Escherichia coli ECRC98 1.00 JDDGAC_01950 mdtK multidrug efflux MATE transporter MdtK 1.00 JDDGAC_12130 yajD HNH nuclease YajD — —
Escherichia coli ECRC101 1.00 MCAODC_18050 mdtK multidrug efflux MATE transporter MdtK 1.00 MCAODC_27700 yajD HNH nuclease YajD — —
Escherichia coli ECRC102 1.00 NIAGMN_00705 mdtK multidrug efflux MATE transporter MdtK 1.00 NIAGMN_06530 yajD HNH nuclease YajD — —
Escherichia coli ECRC99 1.00 KEDOAH_00750 mdtK multidrug efflux MATE transporter MdtK 1.00 KEDOAH_19490 yajD HNH nuclease YajD — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF3613 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps 0.98 GFF4311 hypothetical protein low > 78
Enterobacter sp. TBS_079 0.91 MPMX20_01973 Multidrug resistance protein MdtK 0.96 MPMX20_02051 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS16535 MATE family efflux transporter 0.93 BWI76_RS11525 HNH endonuclease low > 92
Enterobacter asburiae PDN3 0.89 EX28DRAFT_1660 putative efflux protein, MATE family 0.96 EX28DRAFT_1515 HNH endonuclease low > 76
Serratia liquefaciens MT49 0.77 IAI46_11210 MATE family efflux transporter 0.90 IAI46_06985 HNH nuclease family protein low > 86
Pantoea sp. MT58 0.76 IAI47_10820 MATE family efflux transporter 0.95 IAI47_21425 HNH nuclease family protein low > 76
Pectobacterium carotovorum WPP14 0.73 HER17_RS09220 MATE family efflux transporter 0.91 HER17_RS04635 HNH nuclease YajD low > 75
Dickeya dianthicola 67-19 0.73 HGI48_RS12700 MATE family efflux transporter 0.96 HGI48_RS12750 HNH nuclease family protein low > 71
Dickeya dianthicola ME23 0.73 DZA65_RS13155 MATE family efflux transporter 0.94 DZA65_RS13205 HNH nuclease family protein low > 75
Rahnella sp. WP5 0.72 EX31_RS13855 MATE family efflux transporter 0.95 EX31_RS07385 HNH nuclease family protein low > 89
Shewanella sp. ANA-3 0.50 Shewana3_2039 MATE efflux family protein (RefSeq) 0.61 Shewana3_2718 hypothetical protein (RefSeq) low > 73
Shewanella loihica PV-4 0.50 Shew_2037 MATE efflux family protein (RefSeq) 0.66 Shew_1709 hypothetical protein (RefSeq) — —
Shewanella oneidensis MR-1 0.50 SO2295 MATE efflux family protein (NCBI ptt file) 0.60 SO1738 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.49 Sama_1761 MATE efflux family protein (RefSeq) 0.61 Sama_1176 hypothetical protein (RefSeq) low > 62
Pseudomonas sp. S08-1 0.43 OH686_02075 Na(+)/drug antiporter, MATE family of MDR efflux pumps 0.46 OH686_05285 Uncharacterized protein YajD low > 80
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_4049 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps 0.53 PfGW456L13_4488 putative cytoplasmic protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_3892 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps 0.53 Pf1N1B4_3353 putative cytoplasmic protein low > 87
Pseudomonas stutzeri RCH2 0.40 Psest_2549 putative efflux protein, MATE family 0.53 Psest_2796 HNH endonuclease. low > 67
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_12790 norM MATE family efflux transporter 0.55 OKGIIK_10220 YajD family HNH nuclease low > 52

Not shown: 61 genomes with orthologs for ECD_01634 only; 0 genomes with orthologs for ECD_00358 only