Conservation of cofitness between CSW01_08565 and CSW01_16870 in Vibrio cholerae E7946 ATCC 55056

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08565 hypothetical protein 1.0 CSW01_16870 GTP-binding protein 0.56 9
Escherichia coli Nissle 1917 0.80 ECOLIN_RS07555 YciI family protein 0.40 ECOLIN_RS12710 zinc-binding GTPase YeiR — —
Escherichia coli BW25113 0.80 b1251 yciI orf, hypothetical protein (VIMSS) 0.41 b2173 yeiR predicted enzyme (NCBI) low > 76
Escherichia fergusonii Becca 0.80 EFB2_02674 Protein YciI 0.41 EFB2_01683 Zinc-binding GTPase YeiR low > 86
Escherichia coli BL21 0.80 ECD_01225 putative DGPF domain-containing enzyme 0.41 ECD_02103 Zn-stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein low > 61
Escherichia coli ECOR38 0.79 HEPCGN_25135 yciI YciI family protein 0.41 HEPCGN_22675 yeiR zinc-binding GTPase YeiR low > 88
Escherichia coli ECRC98 0.79 JDDGAC_05905 yciI YciI family protein 0.40 JDDGAC_27370 yeiR zinc-binding GTPase YeiR low > 87
Escherichia coli ECRC99 0.79 KEDOAH_25665 yciI YciI family protein 0.40 KEDOAH_04775 yeiR zinc-binding GTPase YeiR — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF2737 YciL protein 0.40 GFF3763 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family low > 78
Escherichia coli ECRC100 0.79 OKFHMN_28670 yciI YciI family protein 0.40 OKFHMN_23410 yeiR zinc-binding GTPase YeiR — —
Escherichia coli ECRC102 0.79 NIAGMN_27565 yciI YciI family protein 0.40 NIAGMN_21175 yeiR zinc-binding GTPase YeiR low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_02432 Protein YciI 0.41 OHPLBJKB_01536 Zinc-binding GTPase YeiR — —
Escherichia coli ECRC101 0.79 MCAODC_21590 yciI YciI family protein 0.40 MCAODC_14460 yeiR zinc-binding GTPase YeiR low > 87
Escherichia coli ECOR27 0.79 NOLOHH_20380 yciI YciI family protein 0.41 NOLOHH_14985 yeiR zinc-binding GTPase YeiR low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_02577 Protein YciI 0.40 MPMX20_03139 Zinc-binding GTPase YeiR low > 85
Shewanella oneidensis MR-1 0.78 SO3036 conserved hypothetical protein (NCBI ptt file) 0.34 SO1502 cobalamin synthesis protein/P47K family protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.78 Shewana3_1504 YciI-like protein (RefSeq) 0.33 Shewana3_2927 cobalamin synthesis protein, P47K (RefSeq) low > 73
Shewanella loihica PV-4 0.78 Shew_2261 YciI-like protein (RefSeq) 0.34 Shew_2776 cobalamin synthesis protein, P47K (RefSeq) low > 60
Enterobacter asburiae PDN3 0.77 EX28DRAFT_0921 Uncharacterized protein conserved in bacteria 0.42 EX28DRAFT_0388 Putative GTPases (G3E family) low > 76
Shewanella amazonensis SB2B 0.77 Sama_2138 YciI-like protein (RefSeq) 0.34 Sama_2446 cobalamin synthesis protein/P47K family protein (RefSeq) low > 62
Pseudomonas lactucae CFBP13502 0.77 GEMAOFIL_04594 Protein YciI 0.23 GEMAOFIL_00123 Zinc-binding GTPase YeiR low > 96
Serratia liquefaciens MT49 0.76 IAI46_14115 YciI family protein 0.41 IAI46_17295 GTP-binding protein — —
Klebsiella pneumoniae MKP103 0.76 KDGMDA_24425 YciI family protein 0.42 KDGMDA_26700 Zinc-binding GTPase YeiR low > 95
Pseudomonas simiae WCS417 0.76 PS417_22285 hypothetical protein 0.25 PS417_28275 cobalamin biosynthesis protein CobW low > 88
Klebsiella michiganensis M5al 0.75 BWI76_RS17195 hypothetical protein 0.41 BWI76_RS19760 GTP-binding protein low > 92
Pseudomonas fluorescens SBW25 0.75 PFLU_RS23925 YciI family protein 0.25 PFLU_RS29940 cobalamin biosynthesis protein CobW low > 109
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS23925 YciI family protein 0.25 PFLU_RS29940 cobalamin biosynthesis protein CobW low > 109
Dickeya dianthicola ME23 0.75 DZA65_RS10900 YciI family protein 0.42 DZA65_RS09545 GTP-binding protein low > 75
Pseudomonas orientalis W4I3 0.75 QF045_RS24415 YciI family protein 0.25 QF045_RS02640 CobW-like GTP-binding protein low > 93
Dickeya dadantii 3937 0.75 DDA3937_RS10420 YciI family protein 0.43 DDA3937_RS09205 GTP-binding protein low > 74
Pectobacterium carotovorum WPP14 0.75 HER17_RS10975 YciI family protein 0.41 HER17_RS12885 GTP-binding protein low > 75
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_18485 hypothetical protein 0.24 AO356_11955 cobalamin biosynthesis protein CobW — —
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_18510 hypothetical protein 0.22 AO353_10095 cobalamin biosynthesis protein CobW low > 101
Dickeya dianthicola 67-19 0.74 HGI48_RS10425 YciI family protein 0.42 HGI48_RS09240 GTP-binding protein low > 71
Pseudomonas sp. RS175 0.74 PFR28_03321 Protein YciI 0.22 PFR28_04530 Zinc-binding GTPase YeiR low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_3588 YCII-related protein 0.25 Psyr_5072 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K — —
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_3588 YCII-related protein 0.25 Psyr_5072 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K — —
Pseudomonas sp. DMC3 0.73 GFF2397 Protein YciI 0.20 GFF519 Zinc-binding GTPase YeiR low > 89
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4407 YciL protein 0.21 PfGW456L13_715 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family low > 87
Pseudomonas sp. SVBP6 0.72 COO64_RS21765 YciI family protein 0.22 COO64_RS01880 GTP-binding protein low > 93
Pseudomonas putida KT2440 0.72 PP_4502 putative enzyme 0.24 PP_5359 CobW/P47K family protein low > 96
Pantoea agglomerans CFBP13505 P0401 0.71 PagCFBP13505_RS02965 YciI family protein 0.40 PagCFBP13505_RS00720 GTP-binding protein low > 74
Pseudomonas stutzeri RCH2 0.71 Psest_1886 Uncharacterized protein conserved in bacteria 0.24 Psest_4342 Putative GTPases (G3E family) low > 67
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_5623 YciL protein 0.25 Pf6N2E2_4266 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family low > 103
Pantoea sp. MT58 0.70 IAI47_09125 YciI family protein 0.43 IAI47_06635 GTP-binding protein low > 76
Pseudomonas segetis P6 0.69 ACVTMO_RS14450 YciI family protein 0.21 ACVTMO_RS00990 CobW family GTP-binding protein low > 75
Pseudomonas aeruginosa PA14 0.68 IKLFDK_16275 YciI family protein 0.21 IKLFDK_25750 cobalamin biosynthesis protein CobW low > 98
Rahnella sp. WP5 0.68 EX31_RS10020 YciI family protein 0.41 EX31_RS19110 GTP-binding protein low > 89
Pseudomonas aeruginosa MRSN321 0.68 DY961_RS00905 YciI family protein 0.21 DY961_RS25965 CobW family GTP-binding protein low > 100
Pseudomonas aeruginosa PUPa3 0.68 DQ20_RS40135 YciI family protein 0.22 DQ20_RS58390 CobW family GTP-binding protein low > 101
Pseudomonas sp. S08-1 0.68 OH686_20785 YciL protein 0.23 OH686_12895 Metal chaperone low > 80
Marinobacter adhaerens HP15 0.68 HP15_2225 YciI-like protein 0.36 HP15_889 cobalamin synthesis protein/P47K family protein low > 73
Pseudomonas sp. BP01 0.63 JOY50_RS01085 YciI family protein 0.24 JOY50_RS08700 GTP-binding protein low > 84
Acinetobacter radioresistens SK82 0.50 MPMX26_02640 Protein YciI 0.27 MPMX26_02365 Zinc-binding GTPase YeiR low > 36
Acinetobacter baumannii LAC-4 0.50 RR41_RS02880 YciI family protein 0.27 RR41_RS08605 GTP-binding protein low > 55

Not shown: 19 genomes with orthologs for CSW01_08565 only; 2 genomes with orthologs for CSW01_16870 only