Conservation of cofitness between CSW01_07480 and CSW01_13960 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07480 ribosomal RNA large subunit methyltransferase K/L 1.0 CSW01_13960 potassium uptake protein TrkH 0.73 1
Pantoea agglomerans CFBP13505 P0401 0.57 PagCFBP13505_RS04640 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.67 PagCFBP13505_RS15190 Trk system potassium transporter TrkH low > 74
Escherichia coli ECOR27 0.57 NOLOHH_21835 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.66 NOLOHH_06360 trkH Trk system potassium transporter TrkH low > 76
Escherichia coli ECRC62 0.57 BNILDI_20000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.66 BNILDI_05170 trkH Trk system potassium transporter TrkH low > 75
Escherichia coli ECRC99 0.57 KEDOAH_22455 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.66 KEDOAH_13920 trkH Trk system potassium transporter TrkH — —
Escherichia coli ECRC102 0.57 NIAGMN_03000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.66 NIAGMN_11985 trkH Trk system potassium transporter TrkH — —
Escherichia coli ECRC100 0.57 OKFHMN_05280 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.66 OKFHMN_14230 trkH Trk system potassium transporter TrkH — —
Escherichia coli ECRC101 0.57 MCAODC_24670 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.66 MCAODC_04735 trkH Trk system potassium transporter TrkH — —
Escherichia coli Nissle 1917 0.57 ECOLIN_RS04980 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.66 ECOLIN_RS22195 Trk system potassium transporter TrkH low > 55
Escherichia fergusonii Becca 0.57 EFB2_03123 Ribosomal RNA large subunit methyltransferase K/L 0.66 EFB2_04768 Trk system potassium uptake protein TrkH low > 86
Escherichia coli ECOR38 0.57 HEPCGN_23240 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.66 HEPCGN_12860 trkH Trk system potassium transporter TrkH low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_02718 Ribosomal RNA large subunit methyltransferase K/L 0.66 OHPLBJKB_04204 Trk system potassium uptake protein TrkH low > 74
Escherichia coli BW25113 0.57 b0948 ycbY predicted methyltransferase (NCBI) 0.66 b3849 trkH potassium transporter (NCBI) low > 76
Escherichia coli ECRC98 0.57 JDDGAC_08890 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.66 JDDGAC_17855 trkH Trk system potassium transporter TrkH — —
Escherichia coli BL21 0.57 ECD_00952 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM-dependent 0.65 ECD_03740 potassium transporter low > 61
Pantoea sp. MT58 0.57 IAI47_12690 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.67 IAI47_18215 Trk system potassium transporter TrkH low > 76
Pectobacterium carotovorum WPP14 0.56 HER17_RS11990 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.67 HER17_RS20535 Trk system potassium transporter TrkH low > 75
Serratia liquefaciens MT49 0.56 IAI46_08820 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.66 IAI46_01150 Trk system potassium transporter TrkH low > 86
Dickeya dianthicola ME23 0.56 DZA65_RS13375 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.68 DZA65_RS01050 Trk system potassium transporter TrkH low > 75
Dickeya dianthicola 67-19 0.56 HGI48_RS12910 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.67 HGI48_RS00990 Trk system potassium transporter TrkH low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF3239 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 0.66 GFF276 Potassium uptake protein TrkH low > 78
Dickeya dadantii 3937 0.56 DDA3937_RS12840 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.67 DDA3937_RS20235 Trk system potassium transporter TrkH low > 74
Enterobacter sp. TBS_079 0.56 MPMX20_01599 Ribosomal RNA large subunit methyltransferase K/L 0.66 MPMX20_04433 Trk system potassium uptake protein TrkH low > 85
Erwinia amylovora T8 0.55 OLJFJH_15975 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.64 OLJFJH_06570 Trk system potassium transporter TrkH low > 58
Enterobacter asburiae PDN3 0.55 EX28DRAFT_1995 Predicted N6-adenine-specific DNA methylase 0.66 EX28DRAFT_4513 Trk-type K+ transport systems, membrane components low > 76
Rahnella sp. WP5 0.55 EX31_RS18080 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.64 EX31_RS14550 Trk system potassium transporter TrkH low > 89
Klebsiella michiganensis M5al 0.55 BWI76_RS09925 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase 0.66 BWI76_RS01385 potassium transporter low > 92
Klebsiella pneumoniae MKP103 0.55 KDGMDA_18160 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.66 KDGMDA_09870 Trk system potassium transporter TrkH low > 95
Erwinia tracheiphila SCR3 0.54 LU632_RS09965 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.65 LU632_RS23935 trkH Trk system potassium transporter TrkH low > 74
Erwinia tracheiphila HP pepo 2.2 0.53 IJEDHG_20480 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.65 IJEDHG_08570 trkH Trk system potassium transporter TrkH low > 61
Shewanella loihica PV-4 0.50 Shew_1812 23S rRNA m(2)G2445 methyltransferase (RefSeq) 0.71 Shew_0022 TrkH family potassium uptake protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.50 Sama_1600 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) 0.71 Sama_0035 TrkH family potassium uptake protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.49 SO1851 conserved hypothetical protein (NCBI ptt file) 0.67 SO0024 trkH-1 potassium uptake protein TrkH (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.49 Shewana3_1601 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) 0.68 Shewana3_0027 TrkH family potassium uptake protein (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.44 MIT1002_02036 Ribosomal RNA large subunit methyltransferase K/L 0.70 MIT1002_00016 Trk system potassium uptake protein TrkH — —
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_2229 23S rRNA m(2)G-2445 methyltransferase (EC 2.1.1.52) 0.59 B158DRAFT_0394 potassium uptake protein, TrkH family — —

Not shown: 30 genomes with orthologs for CSW01_07480 only; 6 genomes with orthologs for CSW01_13960 only