Conservation of cofitness between CSW01_10710 and CSW01_13620 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10710 deferrochelatase 1.0 CSW01_13620 aspartate ammonia-lyase 0.61 10
Serratia liquefaciens MT49 0.43 IAI46_18515 Dyp-type peroxidase 0.75 IAI46_01480 aspartate ammonia-lyase low > 87
Rahnella sp. WP5 0.42 EX31_RS20230 Dyp-type peroxidase 0.77 EX31_RS08965 aspartate ammonia-lyase low > 89
Dickeya dianthicola 67-19 0.41 HGI48_RS04395 Dyp-type peroxidase 0.73 HGI48_RS02695 aspartate ammonia-lyase low > 71
Dickeya dadantii 3937 0.41 DDA3937_RS04420 Dyp-type peroxidase 0.73 DDA3937_RS02720 aspartate ammonia-lyase low > 74
Dickeya dianthicola ME23 0.41 DZA65_RS04310 Dyp-type peroxidase 0.73 DZA65_RS02850 aspartate ammonia-lyase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01291 putative deferrochelatase/peroxidase YfeX 0.75 OHPLBJKB_03904 Aspartate ammonia-lyase low > 74
Klebsiella michiganensis M5al 0.40 BWI76_RS20710 dyp-type peroxidase family protein 0.74 BWI76_RS02330 aspartate ammonia-lyase low > 92
Escherichia coli ECRC99 0.40 KEDOAH_06100 yfeX porphyrinogen peroxidase 0.75 KEDOAH_15735 aspA aspartate ammonia-lyase — —
Escherichia coli ECRC102 0.40 NIAGMN_19890 yfeX porphyrinogen peroxidase 0.75 NIAGMN_10275 aspA aspartate ammonia-lyase low > 80
Klebsiella pneumoniae MKP103 0.40 KDGMDA_27550 peroxidase 0.75 KDGMDA_10820 aspartate ammonia-lyase low > 95
Escherichia coli ECRC98 0.40 JDDGAC_26070 yfeX porphyrinogen peroxidase 0.75 JDDGAC_16065 aspA aspartate ammonia-lyase low > 87
Escherichia coli ECRC101 0.40 MCAODC_12650 yfeX porphyrinogen peroxidase 0.75 MCAODC_02940 aspA aspartate ammonia-lyase low > 87
Escherichia coli ECRC100 0.40 OKFHMN_22120 yfeX porphyrinogen peroxidase 0.75 OKFHMN_12430 aspA aspartate ammonia-lyase low > 79
Escherichia coli BW25113 0.40 b2431 b2431 orf, hypothetical protein (VIMSS) 0.75 b4139 aspA aspartate ammonia-lyase (aspartase) (VIMSS) low > 76
Escherichia fergusonii Becca 0.40 EFB2_01448 Dye-decolorizing peroxidase YfeX 0.75 EFB2_04396 Aspartate ammonia-lyase low > 86
Pectobacterium carotovorum WPP14 0.40 HER17_RS17230 Dyp-type peroxidase 0.75 HER17_RS19355 aspartate ammonia-lyase low > 75
Enterobacter sp. TBS_079 0.40 MPMX20_03318 Dye-decolorizing peroxidase YfeX 0.75 MPMX20_00419 Aspartate ammonia-lyase low > 85
Escherichia coli ECRC62 0.40 BNILDI_12665 yfeX porphyrinogen peroxidase 0.75 BNILDI_06795 aspA aspartate ammonia-lyase low > 75
Escherichia coli ECOR27 0.40 NOLOHH_13800 yfeX porphyrinogen peroxidase 0.75 NOLOHH_04695 aspA aspartate ammonia-lyase low > 76
Escherichia coli ECOR38 0.40 HEPCGN_21295 yfeX porphyrinogen peroxidase 0.75 HEPCGN_10655 aspA aspartate ammonia-lyase low > 88
Escherichia coli Nissle 1917 0.40 ECOLIN_RS13940 porphyrinogen peroxidase 0.75 ECOLIN_RS24045 aspartate ammonia-lyase low > 55
Escherichia coli BL21 0.40 ECD_02331 porphyrinogen oxidase, cytoplasmic 0.75 ECD_04009 aspartate ammonia-lyase low > 61
Enterobacter asburiae PDN3 0.39 EX28DRAFT_0204 Dyp-type peroxidase family 0.75 EX28DRAFT_3336 aspartate ammonia-lyase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF2061 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup 0.75 GFF2013 Aspartate ammonia-lyase (EC 4.3.1.1) low > 78
Shewanella amazonensis SB2B 0.34 Sama_0670 melanin biosynthesis protein TyrA, putative (RefSeq) 0.45 Sama_0789 aspartate ammonia-lyase (RefSeq) low > 62
Acinetobacter radioresistens SK82 0.32 MPMX26_00092 Dye-decolorizing peroxidase YfeX 0.54 MPMX26_01469 Aspartate ammonia-lyase low > 36
Acinetobacter baumannii LAC-4 0.30 RR41_RS18200 Dyp-type peroxidase 0.46 RR41_RS12875 aspartate ammonia-lyase 0.43 9
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_25350 peroxidase 0.51 AO353_09950 aspartate ammonia-lyase low > 101
Pseudomonas simiae WCS417 0.30 PS417_11115 peroxidase 0.51 PS417_28130 aspartate ammonia-lyase — —
Bacteroides ovatus ATCC 8483 0.29 BACOVA_00506 Dyp-type peroxidase family protein 0.51 BACOVA_01069 aspartate ammonia-lyase low > 96
Bacteroides thetaiotaomicron VPI-5482 0.28 BT1219 conserved hypothetical protein (NCBI ptt file) 0.50 BT2755 aspartate ammonia-lyase (NCBI ptt file) low > 81
Pseudomonas sp. DMC3 0.19 GFF3728 Dye-decolorizing peroxidase YfeX 0.51 GFF488 Aspartate ammonia-lyase low > 89
Pseudomonas sp. RS175 0.19 PFR28_01310 Dye-decolorizing peroxidase YfeX 0.51 PFR28_04498 Aspartate ammonia-lyase — —
Pseudomonas fluorescens FW300-N1B4 0.18 Pf1N1B4_5683 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup 0.51 Pf1N1B4_2025 Aspartate ammonia-lyase (EC 4.3.1.1) — —
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_2809 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup 0.51 PfGW456L13_742 Aspartate ammonia-lyase (EC 4.3.1.1) — —
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_01290 peroxidase 0.51 AO356_11090 aspartate ammonia-lyase — —
Pseudomonas putida KT2440 0.17 PP_3248 Dyp-type peroxidase family protein 0.51 PP_5338 aspartate ammonia-lyase low > 96
Pseudomonas sp. BP01 0.17 JOY50_RS26550 Dyp-type peroxidase 0.51 JOY50_RS08810 aspA aspartate ammonia-lyase low > 84

Not shown: 11 genomes with orthologs for CSW01_10710 only; 32 genomes with orthologs for CSW01_13620 only