Conservation of cofitness between CSW01_01030 and CSW01_13385 in Vibrio cholerae E7946 ATCC 55056

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01030 AraC family transcriptional regulator 1.0 CSW01_13385 acetylornithine deacetylase 0.61 9
Pseudomonas segetis P6 0.31 MPMX49_02683 HTH-type transcriptional activator RhaS 0.46 MPMX49_04450 Acetylornithine deacetylase low > 75
Pseudomonas aeruginosa PUPa3 0.30 DQ20_RS53855 AraC family transcriptional regulator 0.42 DQ20_RS50215 argE;go_function=deacetylase acetylornithine deacetylase low > 101
Pseudomonas sp. SVBP6 0.30 COO64_RS23670 AraC family transcriptional regulator 0.44 COO64_RS00920 argE acetylornithine deacetylase low > 93
Pseudomonas aeruginosa PA14 0.30 IKLFDK_07760 AraC family transcriptional regulator 0.42 IKLFDK_27440 acetylornithine deacetylase low > 98
Pseudomonas aeruginosa MRSN321 0.30 DY961_RS19745 AraC family transcriptional regulator 0.42 DY961_RS11900 argE;go_function=deacetylase acetylornithine deacetylase low > 100
Shewanella loihica PV-4 0.29 Shew_1463 AraC family transcriptional regulator (RefSeq) 0.50 Shew_0201 acetylornithine deacetylase (RefSeq) low > 60
Ralstonia solanacearum GMI1000 0.29 RS_RS22500 AraC family transcriptional regulator 0.22 RS_RS08270 acetylornithine deacetylase low > 80
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_3131 L-rhamnose operon transcriptional activator RhaR 0.43 PfGW456L13_912 Acetylornithine deacetylase (EC 3.5.1.16) low > 87
Ralstonia solanacearum UW163 0.26 UW163_RS02330 AraC family transcriptional regulator 0.22 UW163_RS14760 acetylornithine deacetylase — —
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS11255 AraC family transcriptional regulator 0.22 RALBFv3_RS01450 acetylornithine deacetylase low > 76
Shewanella amazonensis SB2B 0.26 Sama_1551 AraC/XylS family transcriptional regulator (RefSeq) 0.52 Sama_0255 acetylornithine deacetylase (RefSeq) low > 62
Pseudomonas sp. RS175 0.21 PFR28_02366 HTH-type transcriptional activator RhaS 0.45 PFR28_04309 Acetylornithine deacetylase low > 88
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_24435 AraC family transcriptional regulator 0.44 AO356_13080 acetylornithine deacetylase low > 104
Pseudomonas simiae WCS417 0.20 PS417_03390 AraC family transcriptional regulator 0.44 PS417_27200 acetylornithine deacetylase low > 88
Pseudomonas fluorescens FW300-N2E2 0.20 Pf6N2E2_575 Transcriptional regulator, AraC family 0.44 Pf6N2E2_4496 Acetylornithine deacetylase (EC 3.5.1.16) low > 103
Erwinia tracheiphila SCR3 0.13 LU632_RS11690 rhaS HTH-type transcriptional activator RhaS 0.58 LU632_RS19620 argE acetylornithine deacetylase low > 73
Escherichia coli BW25113 0.13 b3905 rhaS DNA-binding transcriptional activator, L-rhamnose-binding (NCBI) 0.60 b3957 argE acetylornithine deacetylase (NCBI) low > 76
Escherichia coli ECRC62 0.13 BNILDI_05505 rhaS HTH-type transcriptional activator RhaS 0.60 BNILDI_05790 argE acetylornithine deacetylase low > 75
Erwinia tracheiphila HP pepo 2.2 0.13 IJEDHG_22880 rhaS HTH-type transcriptional activator RhaS 0.58 IJEDHG_13040 argE acetylornithine deacetylase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_04145 HTH-type transcriptional activator RhaS 0.60 OHPLBJKB_04093 Acetylornithine deacetylase low > 74
Escherichia coli ECOR27 0.13 NOLOHH_06020 rhaS HTH-type transcriptional activator RhaS 0.60 NOLOHH_05735 argE acetylornithine deacetylase 0.69 26
Escherichia coli ECRC101 0.13 MCAODC_04390 rhaS HTH-type transcriptional activator RhaS 0.59 MCAODC_04090 argE acetylornithine deacetylase low > 87
Escherichia coli ECRC100 0.13 OKFHMN_13890 rhaS HTH-type transcriptional activator RhaS 0.59 OKFHMN_13590 argE acetylornithine deacetylase low > 79
Escherichia coli ECRC102 0.13 NIAGMN_11645 rhaS HTH-type transcriptional activator RhaS 0.59 NIAGMN_11340 argE acetylornithine deacetylase low > 80
Escherichia coli ECRC99 0.13 KEDOAH_14265 rhaS HTH-type transcriptional activator RhaS 0.59 KEDOAH_14570 argE acetylornithine deacetylase — —
Escherichia coli BL21 0.13 ECD_03791 transcriptional activator of rhaBAD and rhaT 0.60 ECD_03842 acetylornithine deacetylase low > 61
Escherichia coli ECRC98 0.13 JDDGAC_17515 rhaS HTH-type transcriptional activator RhaS 0.59 JDDGAC_17215 argE acetylornithine deacetylase low > 87
Escherichia fergusonii Becca 0.13 EFB2_04712 HTH-type transcriptional activator RhaS 0.60 EFB2_04657 Acetylornithine deacetylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.12 Psyr_3543 transcriptional regulator, AraC family 0.43 Psyr_0253 acetylornithine deacetylase low > 86
Escherichia coli Nissle 1917 0.12 ECOLIN_RS22500 HTH-type transcriptional activator RhaS 0.60 ECOLIN_RS22840 acetylornithine deacetylase low > 55
Pseudomonas syringae pv. syringae B728a 0.12 Psyr_3543 transcriptional regulator, AraC family 0.43 Psyr_0253 acetylornithine deacetylase low > 86
Escherichia coli ECOR38 0.12 HEPCGN_12530 rhaS HTH-type transcriptional activator RhaS 0.60 HEPCGN_12235 argE acetylornithine deacetylase low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.11 GFF2266 L-rhamnose operon regulatory protein RhaS 0.60 GFF2343 Acetylornithine deacetylase (EC 3.5.1.16) low > 78

Not shown: 3 genomes with orthologs for CSW01_01030 only; 54 genomes with orthologs for CSW01_13385 only