Conservation of cofitness between CSW01_02065 and CSW01_12980 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02065 lysine-sensitive aspartokinase 3 1.0 CSW01_12980 ATP-dependent RNA helicase DbpA 0.48 10
Shewanella amazonensis SB2B 0.56 Sama_0603 aspartate kinase III (RefSeq) 0.68 Sama_0752 ATP-dependent RNA helicase DbpA (RefSeq) low > 62
Dickeya dadantii 3937 0.56 DDA3937_RS19020 lysine-sensitive aspartokinase 3 0.53 DDA3937_RS11045 ATP-dependent RNA helicase DbpA low > 74
Dickeya dianthicola 67-19 0.56 HGI48_RS19105 lysine-sensitive aspartokinase 3 0.52 HGI48_RS11065 ATP-dependent RNA helicase DbpA low > 71
Dickeya dianthicola ME23 0.55 DZA65_RS20225 lysine-sensitive aspartokinase 3 0.52 DZA65_RS11470 ATP-dependent RNA helicase DbpA low > 75
Shewanella sp. ANA-3 0.54 Shewana3_0652 aspartate kinase III (RefSeq) 0.67 Shewana3_3384 ATP-dependent RNA helicase DbpA (RefSeq) low > 73
Pectobacterium carotovorum WPP14 0.54 HER17_RS02335 lysine-sensitive aspartokinase 3 0.53 HER17_RS06775 ATP-dependent RNA helicase DbpA low > 75
Klebsiella michiganensis M5al 0.54 BWI76_RS01790 lysine-sensitive aspartokinase 3 0.50 BWI76_RS12705 ATP-dependent RNA helicase low > 92
Shewanella oneidensis MR-1 0.54 SO3986 lysC aspartokinase III, lysine-sensitive (NCBI ptt file) 0.66 SO0897 dbpA ATP-dependent RNA helicase DbpA (NCBI ptt file) low > 76
Enterobacter asburiae PDN3 0.54 EX28DRAFT_4319 aspartate kinase (EC 2.7.2.4) 0.51 EX28DRAFT_1006 Superfamily II DNA and RNA helicases low > 76
Shewanella loihica PV-4 0.54 Shew_0779 aspartate kinase III (RefSeq) 0.62 Shew_0598 ATP-dependent RNA helicase DbpA (RefSeq) low > 60
Enterobacter sp. TBS_079 0.54 MPMX20_00240 Lysine-sensitive aspartokinase 3 0.51 MPMX20_02441 ATP-dependent RNA helicase DbpA low > 85
Pantoea agglomerans CFBP13505 P0401 0.54 PagCFBP13505_RS22275 lysine-sensitive aspartokinase 3 0.49 PagCFBP13505_RS10105 ATP-dependent RNA helicase DbpA low > 74
Rahnella sp. WP5 0.53 EX31_RS11810 lysine-sensitive aspartokinase 3 0.52 EX31_RS24740 ATP-dependent RNA helicase DbpA low > 89
Pantoea sp. MT58 0.53 IAI47_17960 lysine-sensitive aspartokinase 3 0.49 IAI47_15055 ATP-dependent RNA helicase DbpA low > 76
Erwinia tracheiphila HP pepo 2.2 0.53 IJEDHG_08510 lysC lysine-sensitive aspartokinase 3 0.48 IJEDHG_24880 dbpA ATP-dependent RNA helicase DbpA low > 61
Erwinia tracheiphila SCR3 0.53 LU632_RS22375 lysC lysine-sensitive aspartokinase 3 0.48 LU632_RS11995 dbpA ATP-dependent RNA helicase DbpA low > 73
Klebsiella pneumoniae MKP103 0.53 KDGMDA_10230 lysine-sensitive aspartokinase 3 0.52 KDGMDA_20600 ATP-dependent RNA helicase DbpA low > 95
Serratia liquefaciens MT49 0.52 IAI46_23100 lysine-sensitive aspartokinase 3 0.55 IAI46_14765 ATP-dependent RNA helicase DbpA low > 87
Erwinia amylovora T8 0.51 OLJFJH_03640 lysine-sensitive aspartokinase 3 0.52 OLJFJH_13775 ATP-dependent RNA helicase DbpA low > 58
Escherichia coli ECOR38 0.51 HEPCGN_11690 lysC lysine-sensitive aspartokinase 3 0.52 HEPCGN_26000 dbpA ATP-dependent RNA helicase DbpA low > 88
Escherichia coli BL21 0.50 ECD_03896 lysine-sensitive aspartokinase 3 0.52 ECD_01320 ATP-dependent RNA helicase, specific for 23S rRNA low > 61
Escherichia coli BW25113 0.50 b4024 lysC aspartate kinase III (NCBI) 0.52 b1343 dbpA ATP-dependent RNA helicase, specific for 23S rRNA (NCBI) low > 76
Escherichia coli ECRC99 0.50 KEDOAH_14980 lysC lysine-sensitive aspartokinase 3 0.52 KEDOAH_26595 dbpA ATP-dependent RNA helicase DbpA — —
Escherichia coli ECRC101 0.50 MCAODC_03680 lysC lysine-sensitive aspartokinase 3 0.52 MCAODC_16095 dbpA ATP-dependent RNA helicase DbpA low > 87
Escherichia coli ECRC98 0.50 JDDGAC_16805 lysC lysine-sensitive aspartokinase 3 0.52 JDDGAC_04720 dbpA ATP-dependent RNA helicase DbpA low > 87
Escherichia coli ECRC100 0.50 OKFHMN_13180 lysC lysine-sensitive aspartokinase 3 0.52 OKFHMN_02160 dbpA ATP-dependent RNA helicase DbpA low > 79
Escherichia coli ECRC102 0.50 NIAGMN_10930 lysC lysine-sensitive aspartokinase 3 0.52 NIAGMN_26330 dbpA ATP-dependent RNA helicase DbpA low > 80
Escherichia coli ECRC62 0.50 BNILDI_06180 lysC lysine-sensitive aspartokinase 3 0.52 BNILDI_18025 dbpA ATP-dependent RNA helicase DbpA low > 75
Escherichia coli ECOR27 0.50 NOLOHH_05340 lysC lysine-sensitive aspartokinase 3 0.52 NOLOHH_19875 dbpA ATP-dependent RNA helicase DbpA low > 76
Escherichia coli Nissle 1917 0.50 ECOLIN_RS23235 lysine-sensitive aspartokinase 3 0.52 ECOLIN_RS08060 ATP-dependent RNA helicase DbpA low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_04022 Lysine-sensitive aspartokinase 3 0.52 OHPLBJKB_02338 ATP-dependent RNA helicase DbpA low > 74
Escherichia fergusonii Becca 0.50 EFB2_04578 Lysine-sensitive aspartokinase 3 0.52 EFB2_02584 ATP-dependent RNA helicase DbpA low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF1395 Aspartokinase (EC 2.7.2.4) 0.52 GFF2649 ATP-dependent 23S rRNA helicase DbpA low > 78
Alteromonas macleodii MIT1002 0.48 MIT1002_00776 Lysine-sensitive aspartokinase 3 0.45 MIT1002_03748 ATP-independent RNA helicase DbpA — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.28 CA264_02395 aspartate kinase 0.36 CA264_06050 ATP-dependent RNA helicase low > 74

Not shown: 8 genomes with orthologs for CSW01_02065 only; 46 genomes with orthologs for CSW01_12980 only