Conservation of cofitness between CSW01_02270 and CSW01_12240 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02270 malate dehydrogenase 1.0 CSW01_12240 single-stranded-DNA-specific exonuclease RecJ 0.55 8
Escherichia coli ECOR27 0.82 NOLOHH_09595 mdh malate dehydrogenase 0.64 NOLOHH_11505 recJ single-stranded-DNA-specific exonuclease RecJ low > 75
Escherichia fergusonii Becca 0.82 EFB2_00594 Malate dehydrogenase 0.64 EFB2_01009 Single-stranded-DNA-specific exonuclease RecJ low > 86
Escherichia coli ECRC100 0.82 OKFHMN_17795 mdh malate dehydrogenase 0.64 OKFHMN_19580 recJ single-stranded-DNA-specific exonuclease RecJ low > 79
Escherichia coli ECRC99 0.82 KEDOAH_10355 mdh malate dehydrogenase 0.64 KEDOAH_08560 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_00468 Malate dehydrogenase 0.64 OHPLBJKB_00823 Single-stranded-DNA-specific exonuclease RecJ low > 74
Escherichia coli ECRC101 0.82 MCAODC_08315 mdh malate dehydrogenase 0.64 MCAODC_10100 recJ single-stranded-DNA-specific exonuclease RecJ low > 87
Escherichia coli ECRC98 0.82 JDDGAC_21420 mdh malate dehydrogenase 0.64 JDDGAC_23220 recJ single-stranded-DNA-specific exonuclease RecJ low > 87
Escherichia coli ECRC62 0.82 BNILDI_01940 mdh malate dehydrogenase 0.64 BNILDI_10035 recJ single-stranded-DNA-specific exonuclease RecJ low > 75
Escherichia coli BL21 0.82 ECD_03096 malate dehydrogenase, NAD(P)-binding 0.64 ECD_02724 ssDNA exonuclease, 5 low > 61
Escherichia coli BW25113 0.82 b3236 mdh malate dehydrogenase (NCBI) 0.63 b2892 recJ ssDNA exonuclease, 5' --> 3'-specific (NCBI) low > 76
Escherichia coli ECRC102 0.82 NIAGMN_15555 mdh malate dehydrogenase 0.64 NIAGMN_17345 recJ single-stranded-DNA-specific exonuclease RecJ low > 80
Escherichia coli Nissle 1917 0.82 ECOLIN_RS18555 malate dehydrogenase 0.63 ECOLIN_RS16115 single-stranded-DNA-specific exonuclease RecJ low > 55
Escherichia coli ECOR38 0.82 HEPCGN_16660 mdh malate dehydrogenase 0.63 HEPCGN_18870 recJ single-stranded-DNA-specific exonuclease RecJ low > 88
Shewanella sp. ANA-3 0.81 Shewana3_3509 malate dehydrogenase (RefSeq) 0.58 Shewana3_3329 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF2149 Malate dehydrogenase (EC 1.1.1.37) 0.62 GFF2989 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) low > 78
Enterobacter sp. TBS_079 0.81 MPMX20_04140 Malate dehydrogenase 0.62 MPMX20_03751 Single-stranded-DNA-specific exonuclease RecJ low > 85
Enterobacter asburiae PDN3 0.81 EX28DRAFT_3285 malate dehydrogenase (NAD) (EC 1.1.1.37) 0.63 EX28DRAFT_2943 single-stranded-DNA-specific exonuclease RecJ low > 76
Klebsiella pneumoniae MRSN742743 0.81 GJGHJB_00472 mdh malate dehydrogenase 0.63 GJGHJB_00785 recJ single-stranded-DNA-specific exonuclease RecJ low > 83
Klebsiella michiganensis M5al 0.81 BWI76_RS25420 malate dehydrogenase 0.61 BWI76_RS23805 ssDNA exonuclease RecJ low > 92
Klebsiella pneumoniae MKP103 0.81 KDGMDA_06200 malate dehydrogenase 0.63 KDGMDA_04290 single-stranded-DNA-specific exonuclease RecJ low > 94
Shewanella oneidensis MR-1 0.81 SO0770 mdh malate dehydrogenase (NCBI ptt file) 0.58 SO0952 recJ single-stranded-DNA-specific exonuclease RecJ (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.80 Sama_0672 malate dehydrogenase (RefSeq) 0.59 Sama_2737 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 62
Pantoea agglomerans CFBP13505 P0401 0.80 PagCFBP13516_RS02535 mdh malate dehydrogenase 0.64 PagCFBP13516_RS04060 recJ single-stranded-DNA-specific exonuclease RecJ low > 80
Pectobacterium carotovorum WPP14 0.80 HER17_RS18390 malate dehydrogenase 0.60 HER17_RS17880 single-stranded-DNA-specific exonuclease RecJ low > 75
Pantoea sp. MT58 0.80 IAI47_02520 malate dehydrogenase 0.64 IAI47_03830 single-stranded-DNA-specific exonuclease RecJ low > 76
Erwinia tracheiphila HP pepo 2.2 0.79 IJEDHG_13655 mdh malate dehydrogenase 0.62 IJEDHG_03185 recJ single-stranded-DNA-specific exonuclease RecJ low > 61
Erwinia tracheiphila SCR3 0.79 LU632_RS21365 mdh malate dehydrogenase 0.62 LU632_RS05985 recJ single-stranded-DNA-specific exonuclease RecJ low > 73
Shewanella loihica PV-4 0.79 Shew_0867 malate dehydrogenase (RefSeq) 0.60 Shew_0772 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 60
Serratia liquefaciens MT49 0.79 IAI46_01825 malate dehydrogenase 0.64 IAI46_20720 single-stranded-DNA-specific exonuclease RecJ low > 87
Rahnella sp. WP5 0.79 EX31_RS08645 malate dehydrogenase 0.62 EX31_RS13470 single-stranded-DNA-specific exonuclease RecJ low > 89
Dickeya dadantii 3937 0.79 DDA3937_RS02970 malate dehydrogenase 0.63 DDA3937_RS03310 single-stranded-DNA-specific exonuclease RecJ low > 74
Dickeya dianthicola ME23 0.79 DZA65_RS03130 malate dehydrogenase 0.63 DZA65_RS03495 single-stranded-DNA-specific exonuclease RecJ low > 75
Dickeya dianthicola 67-19 0.79 HGI48_RS03135 malate dehydrogenase 0.63 HGI48_RS03450 single-stranded-DNA-specific exonuclease RecJ low > 71
Erwinia amylovora T8 0.77 OLJFJH_06980 malate dehydrogenase 0.62 OLJFJH_08845 single-stranded-DNA-specific exonuclease RecJ low > 58
Alteromonas macleodii MIT1002 0.69 MIT1002_03492 Malate dehydrogenase 0.52 MIT1002_00788 Single-stranded-DNA-specific exonuclease RecJ — —

Not shown: 0 genomes with orthologs for CSW01_02270 only; 53 genomes with orthologs for CSW01_12240 only