Conservation of cofitness between CSW01_04570 and CSW01_11870 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04570 exodeoxyribonuclease 7 small subunit 1.0 CSW01_11870 DNA repair protein RadA 0.79 2
Shewanella amazonensis SB2B 0.59 Sama_2434 exodeoxyribonuclease VII, small subunit (RefSeq) 0.73 Sama_0981 DNA repair protein RadA (RefSeq) low > 62
Klebsiella michiganensis M5al 0.57 BWI76_RS06390 exodeoxyribonuclease VII small subunit 0.82 BWI76_RS04165 DNA repair protein RadA — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS15925 exodeoxyribonuclease VII small subunit 0.77 HER17_RS19085 DNA repair protein RadA low > 75
Enterobacter asburiae PDN3 0.57 EX28DRAFT_2549 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) 0.81 EX28DRAFT_3597 DNA repair protein RadA — —
Enterobacter sp. TBS_079 0.57 MPMX20_01013 Exodeoxyribonuclease 7 small subunit 0.81 MPMX20_00694 DNA repair protein RadA — —
Shewanella sp. ANA-3 0.56 Shewana3_2899 exodeoxyribonuclease VII small subunit (RefSeq) 0.74 Shewana3_1049 DNA repair protein RadA (RefSeq) — —
Klebsiella pneumoniae MKP103 0.55 KDGMDA_14480 exodeoxyribonuclease VII small subunit 0.82 KDGMDA_12435 DNA repair protein RadA — —
Escherichia coli ECRC99 0.55 KEDOAH_19555 xseB exodeoxyribonuclease VII small subunit 0.82 KEDOAH_16960 radA DNA repair protein RadA — —
Escherichia fergusonii Becca 0.55 EFB2_03635 Exodeoxyribonuclease 7 small subunit 0.83 EFB2_04057 DNA repair protein RadA low > 86
Escherichia coli ECOR38 0.55 HEPCGN_07040 xseB exodeoxyribonuclease VII small subunit 0.83 HEPCGN_09195 radA DNA repair protein RadA — —
Escherichia coli BL21 0.55 ECD_00370 exonuclease VII small subunit 0.83 ECD_04265 DNA repair protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_03254 Exodeoxyribonuclease 7 small subunit 0.83 OHPLBJKB_03672 DNA repair protein RadA — —
Escherichia coli Nissle 1917 0.55 ECOLIN_RS02545 exodeoxyribonuclease VII small subunit 0.83 ECOLIN_RS25190 DNA repair protein RadA low > 55
Escherichia coli BW25113 0.55 b0422 xseB exodeoxyribonuclease VII small subunit (NCBI) 0.83 b4389 radA predicted repair protein (NCBI) — —
Escherichia coli ECRC102 0.55 NIAGMN_06465 xseB exodeoxyribonuclease VII small subunit 0.82 NIAGMN_09045 radA DNA repair protein RadA low > 80
Escherichia coli ECRC100 0.55 OKFHMN_08410 xseB exodeoxyribonuclease VII small subunit 0.82 OKFHMN_11195 radA DNA repair protein RadA low > 79
Escherichia coli ECRC98 0.55 JDDGAC_12065 xseB exodeoxyribonuclease VII small subunit 0.82 JDDGAC_14790 radA DNA repair protein RadA — —
Escherichia coli ECRC62 0.55 BNILDI_22775 xseB exodeoxyribonuclease VII small subunit 0.82 BNILDI_08075 radA DNA repair protein RadA — —
Escherichia coli ECOR27 0.55 NOLOHH_01360 xseB exodeoxyribonuclease VII small subunit 0.82 NOLOHH_03520 radA DNA repair protein RadA — —
Escherichia coli ECRC101 0.55 MCAODC_27635 xseB exodeoxyribonuclease VII small subunit 0.82 MCAODC_01710 radA DNA repair protein RadA — —
Dickeya dadantii 3937 0.55 DDA3937_RS05540 exodeoxyribonuclease VII small subunit 0.76 DDA3937_RS02420 DNA repair protein RadA — —
Erwinia amylovora T8 0.54 OLJFJH_18055 exodeoxyribonuclease VII small subunit 0.81 OLJFJH_01590 DNA repair protein RadA — —
Rahnella sp. WP5 0.54 EX31_RS22165 exodeoxyribonuclease VII small subunit 0.81 EX31_RS04030 DNA repair protein RadA — —
Serratia liquefaciens MT49 0.53 IAI46_04935 exodeoxyribonuclease VII small subunit 0.79 IAI46_02945 DNA repair protein RadA low > 87
Dickeya dianthicola 67-19 0.53 HGI48_RS05600 exodeoxyribonuclease VII small subunit 0.76 HGI48_RS02380 DNA repair protein RadA — —
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13505_RS10465 exodeoxyribonuclease VII small subunit 0.80 PagCFBP13505_RS21755 DNA repair protein RadA — —
Dickeya dianthicola ME23 0.52 DZA65_RS05925 exodeoxyribonuclease VII small subunit 0.76 DZA65_RS02485 DNA repair protein RadA — —
Pantoea sp. MT58 0.51 IAI47_14730 exodeoxyribonuclease VII small subunit 0.80 IAI47_16345 DNA repair protein RadA low > 76
Erwinia tracheiphila SCR3 0.51 LU632_RS18840 xseB exodeoxyribonuclease VII small subunit 0.80 LU632_RS02550 radA DNA repair protein RadA — —
Erwinia tracheiphila HP pepo 2.2 0.51 IJEDHG_26040 xseB exodeoxyribonuclease VII small subunit 0.80 IJEDHG_06365 radA DNA repair protein RadA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF4326 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) 0.82 GFF1057 DNA repair protein RadA — —
Shewanella loihica PV-4 0.49 Shew_2769 exodeoxyribonuclease VII, small subunit (RefSeq) 0.40 Shew_2807 DNA repair protein RadA (RefSeq) 0.46 16
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_1920 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) 0.59 B158DRAFT_0877 DNA replication and repair protein RadA low > 40
Pseudomonas aeruginosa PUPa3 0.39 DQ20_RS47970 exodeoxyribonuclease VII small subunit 0.64 DQ20_RS55850 radA;go_function=ATP DNA repair protein RadA low > 101
Pseudomonas aeruginosa MRSN321 0.39 DY961_RS27675 exodeoxyribonuclease VII small subunit 0.64 DY961_RS23385 radA;go_function=ATP DNA repair protein RadA low > 100
Pseudomonas sp. SVBP6 0.37 COO64_RS15820 exodeoxyribonuclease VII small subunit 0.62 COO64_RS02920 radA DNA repair protein RadA — —
Pseudomonas segetis P6 0.35 MPMX49_01007 Exodeoxyribonuclease 7 small subunit 0.62 MPMX49_03982 DNA repair protein RadA low > 75
Dinoroseobacter shibae DFL-12 0.32 Dshi_3296 exodeoxyribonuclease VII, small subunit (RefSeq) 0.41 Dshi_2129 DNA repair protein RadA (RefSeq) — —

Not shown: 0 genomes with orthologs for CSW01_04570 only; 83 genomes with orthologs for CSW01_11870 only