Conservation of cofitness between CSW01_01355 and CSW01_11710 in Vibrio cholerae E7946 ATCC 55056
14 genomes with putative orthologs of both genes
| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_01355 | | UDP-glucose 4-epimerase | 1.0 | CSW01_11710 | | transcriptional regulator | 0.81 | 8 |
| Shewanella oneidensis MR-1 | 0.44 | SO3173 | | UDP-galactose 4-epimerase, putative (NCBI ptt file) | 0.30 | SO1985 | | transcriptional activator, putative (NCBI ptt file) | low | > 76 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_3638 | | UDP-glucose 4-epimerase, putative | 0.19 | Psyr_0891 | | anti-ECFsigma factor, ChrR | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_3638 | | UDP-glucose 4-epimerase, putative | 0.19 | Psyr_0891 | | anti-ECFsigma factor, ChrR | low | > 86 |
| Azospirillum sp. SherDot2 | 0.38 | MPMX19_01806 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase | 0.21 | MPMX19_02021 | | Anti-sigma-E factor ChrR | — | — |
| Azospirillum brasilense Sp245 | 0.36 | AZOBR_RS09095 | | NAD-dependent dehydratase | 0.21 | AZOBR_RS00815 | | putative transcriptional activator | — | — |
| Marinobacter adhaerens HP15 | 0.27 | HP15_2386 | | UDP-glucose 4-epimerase | 0.19 | HP15_269 | | anti-sigma factor ChrR | — | — |
| Shewanella amazonensis SB2B | 0.26 | Sama_2249 | | hypothetical protein (RefSeq) | 0.24 | Sama_2037 | | anti-ECFsigma factor, ChrR (RefSeq) | low | > 62 |
| Bosea sp. OAE506 | 0.20 | ABIE41_RS03860 | | NAD-dependent epimerase/dehydratase family protein | 0.14 | ABIE41_RS10285 | | ChrR family anti-sigma-E factor | low | > 77 |
| Rhodospirillum rubrum S1H | 0.11 | Rru_A0058 | | Dihydrokaempferol 4-reductase (NCBI) | 0.23 | Rru_A0721 | | Anti-Sigm factor, ChrR (NCBI) | low | > 58 |
| Rhodanobacter denitrificans FW104-10B01 | 0.10 | LRK54_RS16530 | | aldehyde reductase | 0.17 | LRK54_RS07505 | | ChrR family anti-sigma-E factor | — | — |
| Rhodanobacter sp. FW510-T8 | 0.10 | OKGIIK_08255 | wcaG | Nucleoside-diphosphate-sugar epimerase | 0.16 | OKGIIK_13925 | | Transcriptional regulator | — | — |
| Rhodanobacter denitrificans MT42 | 0.10 | LRK55_RS16255 | | aldehyde reductase | 0.18 | LRK55_RS07245 | | ChrR family anti-sigma-E factor | low | > 63 |
| Shewanella loihica PV-4 | 0.09 | Shew_1716 | | 3-beta hydroxysteroid dehydrogenase/isomerase (RefSeq) | 0.26 | Shew_1477 | | anti-ECFsigma factor, ChrR (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.09 | Shewana3_2712 | | 3-beta hydroxysteroid dehydrogenase/isomerase (RefSeq) | 0.26 | Shewana3_2466 | | anti-ECFsigma factor, ChrR (RefSeq) | low | > 73 |
Not shown: 53 genomes with orthologs for CSW01_01355 only; 10 genomes with orthologs for CSW01_11710 only