Conservation of cofitness between CSW01_03515 and CSW01_10815 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03515 DNA mismatch repair protein MutH 1.0 CSW01_10815 Cys-tRNA(Pro) deacylase 0.51 2
Erwinia tracheiphila HP pepo 2.2 0.68 IJEDHG_17110 mutH DNA mismatch repair endonuclease MutH 0.50 IJEDHG_01120 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 61
Erwinia tracheiphila SCR3 0.68 LU632_RS06095 mutH DNA mismatch repair endonuclease MutH 0.51 LU632_RS15310 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 73
Enterobacter asburiae PDN3 0.67 EX28DRAFT_2906 DNA mismatch repair protein MutH 0.53 EX28DRAFT_2477 Cys-tRNA(Pro) deacylase low > 76
Serratia liquefaciens MT49 0.67 IAI46_20460 DNA mismatch repair endonuclease MutH 0.55 IAI46_05300 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF1314 DNA mismatch repair endonuclease MutH 0.53 GFF4401 Cys-tRNA(Pro) deacylase YbaK low > 78
Rahnella sp. WP5 0.66 EX31_RS13210 DNA mismatch repair endonuclease MutH 0.55 EX31_RS22565 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 89
Pectobacterium carotovorum WPP14 0.66 HER17_RS16590 DNA mismatch repair endonuclease MutH 0.57 HER17_RS15635 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 75
Enterobacter sp. TBS_079 0.66 MPMX20_03694 DNA mismatch repair protein MutH 0.54 MPMX20_01082 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 85
Klebsiella pneumoniae MKP103 0.65 KDGMDA_03865 DNA mismatch repair endonuclease MutH 0.54 KDGMDA_14930 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 95
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS17060 DNA mismatch repair endonuclease MutH 0.55 PagCFBP13505_RS10790 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 74
Erwinia amylovora T8 0.65 OLJFJH_09040 DNA mismatch repair endonuclease MutH 0.54 OLJFJH_17720 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 58
Escherichia coli ECRC100 0.65 OKFHMN_19990 mutH DNA mismatch repair endonuclease MutH 0.55 OKFHMN_08105 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 79
Escherichia coli ECRC98 0.65 JDDGAC_23655 mutH DNA mismatch repair endonuclease MutH 0.55 JDDGAC_11750 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 87
Escherichia coli ECRC99 0.65 KEDOAH_08140 mutH DNA mismatch repair endonuclease MutH 0.55 KEDOAH_19865 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK — —
Escherichia fergusonii Becca 0.65 EFB2_01052 DNA mismatch repair protein MutH 0.56 EFB2_03577 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 86
Escherichia coli ECOR27 0.65 NOLOHH_11875 mutH DNA mismatch repair endonuclease MutH 0.55 NOLOHH_01035 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 76
Escherichia coli ECRC101 0.65 MCAODC_10515 mutH DNA mismatch repair endonuclease MutH 0.55 MCAODC_27325 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 87
Escherichia coli ECRC102 0.65 NIAGMN_17760 mutH DNA mismatch repair endonuclease MutH 0.55 NIAGMN_06155 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 80
Escherichia coli ECOR38 0.65 HEPCGN_19245 mutH DNA mismatch repair endonuclease MutH 0.55 HEPCGN_06725 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 88
Escherichia coli Nissle 1917 0.64 ECOLIN_RS15895 DNA mismatch repair endonuclease MutH 0.56 ECOLIN_RS02850 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK — —
Escherichia coli BW25113 0.64 b2831 mutH DNA mismatch repair protein (NCBI) 0.55 b0481 ybaK hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00898 DNA mismatch repair protein MutH 0.55 OHPLBJKB_03193 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 74
Escherichia coli BL21 0.64 ECD_02679 methyl-directed mismatch repair protein 0.55 ECD_00432 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase low > 61
Pantoea sp. MT58 0.64 IAI47_03910 DNA mismatch repair endonuclease MutH 0.54 IAI47_14410 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 76
Klebsiella michiganensis M5al 0.64 BWI76_RS23290 DNA mismatch repair protein MutH 0.54 BWI76_RS06870 aminoacyl-tRNA deacylase low > 92
Escherichia coli ECRC62 0.64 BNILDI_10355 mutH DNA mismatch repair endonuclease MutH 0.55 BNILDI_22455 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 75
Dickeya dianthicola ME23 0.63 DZA65_RS05285 DNA mismatch repair endonuclease MutH 0.43 DZA65_RS06215 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 75
Dickeya dianthicola 67-19 0.63 HGI48_RS04950 DNA mismatch repair endonuclease MutH 0.43 HGI48_RS05880 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK — —
Dickeya dadantii 3937 0.63 DDA3937_RS04940 DNA mismatch repair endonuclease MutH 0.50 DDA3937_RS05835 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 74
Shewanella oneidensis MR-1 0.62 SO1330 mutH DNA mismatch repair protein MutH (NCBI ptt file) 0.50 SO1124 conserved hypothetical protein TIGR00011 (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.61 Shewana3_3044 DNA mismatch repair protein (RefSeq) 0.50 Shewana3_0957 ybaK/ebsC protein (RefSeq) low > 73
Shewanella loihica PV-4 0.60 Shew_1037 DNA mismatch repair protein (RefSeq) 0.42 Shew_0016 ybaK/ebsC protein (RefSeq) — —
Shewanella amazonensis SB2B 0.59 Sama_0862 DNA mismatch repair protein (RefSeq) 0.49 Sama_0531 YbaK/EbsC protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.53 MIT1002_00646 Methyl-directed mismatch repair protein 0.49 MIT1002_01641 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK low > 70

Not shown: 1 genomes with orthologs for CSW01_03515 only; 63 genomes with orthologs for CSW01_10815 only