Conservation of cofitness between CSW01_11400 and CSW01_10725 in Vibrio cholerae E7946 ATCC 55056

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11400 lytic transglycosylase 1.0 CSW01_10725 hypothetical protein 0.57 10
Shewanella loihica PV-4 0.46 Shew_2115 lytic transglycosylase, catalytic (RefSeq) 0.48 Shew_3090 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.41 Shewana3_2370 MltD domain-containing protein (RefSeq) 0.45 Shewana3_3245 hypothetical protein (RefSeq)
Pseudomonas sp. S08-1 0.33 OH686_03585 Membrane-bound lytic murein transglycosylase D 0.40 OH686_07835 hypothetical protein low > 80
Pseudomonas segetis P6 0.33 MPMX49_02811 Membrane-bound lytic murein transglycosylase D 0.36 MPMX49_03522 hypothetical protein low > 75
Pseudomonas stutzeri RCH2 0.32 Psest_2070 FOG: LysM repeat 0.41 Psest_1230 Uncharacterized protein conserved in bacteria low > 67
Pseudomonas aeruginosa MRSN321 0.31 DY961_RS20790 lytic transglycosylase domain-containing protein 0.36 DY961_RS16335 winged helix-turn-helix domain-containing protein low > 100
Pseudomonas aeruginosa PA14 0.31 IKLFDK_08810 lytic transglycosylase 0.35 IKLFDK_09925 Winged helix-turn helix low > 98
Pseudomonas aeruginosa PUPa3 0.31 DQ20_RS54870 lytic transglycosylase domain-containing protein 0.36 DQ20_RS38655 winged helix-turn-helix domain-containing protein low > 101
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N 0.36 Psyr_0511 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N 0.36 Psyr_0511 conserved hypothetical protein low > 86
Serratia liquefaciens MT49 0.30 IAI46_04130 murein transglycosylase D 0.63 IAI46_18685 helix-turn-helix domain-containing protein
Rahnella sp. WP5 0.30 EX31_RS21205 murein transglycosylase D 0.62 EX31_RS22810 helix-turn-helix domain-containing protein low > 89
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_586 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 0.38 Pf6N2E2_4668 FIG00953367: hypothetical protein low > 103
Pseudomonas putida KT2440 0.28 PP_4145 Membrane-bound lytic murein transglycosylase D 0.40 PP_4957 conserved protein of unknown function low > 96
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_24475 lytic transglycosylase 0.37 AO356_13735 hypothetical protein low > 104
Pseudomonas sp. BP01 0.27 JOY50_RS07095 lytic transglycosylase domain-containing protein 0.40 JOY50_RS09910 helix-turn-helix domain-containing protein low > 84
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_3341 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 0.35 PfGW456L13_1073 FIG00953367: hypothetical protein low > 87
Pseudomonas sp. RS175 0.27 PFR28_01551 Membrane-bound lytic murein transglycosylase D 0.37 PFR28_04177 hypothetical protein low > 88
Pseudomonas sp. SVBP6 0.27 COO64_RS19245 transglycosylase SLT domain-containing protein 0.40 COO64_RS17595 helix-turn-helix domain-containing protein low > 93
Pseudomonas simiae WCS417 0.26 PS417_12215 lytic transglycosylase 0.37 PS417_26395 hypothetical protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS12905 transglycosylase SLT domain-containing protein 0.37 PFLU_RS28045 helix-turn-helix domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.26 PFLU_RS12905 transglycosylase SLT domain-containing protein 0.37 PFLU_RS28045 helix-turn-helix domain-containing protein low > 109
Pseudomonas orientalis W4I3 0.26 QF045_RS14750 transglycosylase SLT domain-containing protein 0.37 QF045_RS00780 winged helix-turn-helix domain-containing protein low > 93
Pseudomonas lactucae CFBP13502 0.26 GEMAOFIL_02688 Membrane-bound lytic murein transglycosylase D 0.37 GEMAOFIL_05405 hypothetical protein low > 96

Not shown: 39 genomes with orthologs for CSW01_11400 only; 3 genomes with orthologs for CSW01_10725 only