Conservation of cofitness between CSW01_04820 and CSW01_10020 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04820 serine hydroxymethyltransferase 1.0 CSW01_10020 ROK family protein 0.88 18
Dickeya dadantii 3937 0.81 DDA3937_RS15600 serine hydroxymethyltransferase 0.50 DDA3937_RS10675 ROK family transcriptional regulator — —
Dickeya dianthicola ME23 0.81 DZA65_RS16775 serine hydroxymethyltransferase 0.49 DZA65_RS11145 ROK family transcriptional regulator — —
Dickeya dianthicola 67-19 0.81 HGI48_RS15700 serine hydroxymethyltransferase 0.49 HGI48_RS10675 ROK family transcriptional regulator — —
Serratia liquefaciens MT49 0.81 IAI46_19395 serine hydroxymethyltransferase 0.50 IAI46_11685 ROK family transcriptional regulator — —
Pantoea sp. MT58 0.81 IAI47_04960 serine hydroxymethyltransferase 0.45 IAI47_09750 ROK family transcriptional regulator — —
Pantoea agglomerans CFBP13505 P0401 0.81 PagCFBP13505_RS14850 serine hydroxymethyltransferase 0.45 PagCFBP13505_RS06405 ROK family transcriptional regulator — —
Pectobacterium carotovorum WPP14 0.81 HER17_RS05950 serine hydroxymethyltransferase 0.50 HER17_RS10735 ROK family transcriptional regulator — —
Rahnella sp. WP5 0.80 EX31_RS20585 serine hydroxymethyltransferase 0.50 EX31_RS16985 ROK family transcriptional regulator — —
Erwinia tracheiphila SCR3 0.80 LU632_RS17915 serine hydroxymethyltransferase 0.47 LU632_RS12305 ROK family transcriptional regulator — —
Erwinia tracheiphila HP pepo 2.2 0.80 IJEDHG_02915 Serine hydroxymethyltransferase 1 0.47 IJEDHG_23280 transcriptional regulator — —
Erwinia amylovora T8 0.79 OLJFJH_10340 Serine hydroxymethyltransferase 0.48 OLJFJH_14275 transcriptional regulator — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_01156 Serine hydroxymethyltransferase 0.46 OHPLBJKB_02132 Protein mlc low > 74
Escherichia coli ECRC99 0.79 KEDOAH_06710 glyA serine hydroxymethyltransferase 0.47 KEDOAH_00365 mlc DNA-binding transcriptional repressor Mlc — —
Escherichia coli BL21 0.79 ECD_02443 serine hydroxymethyltransferase 0.46 ECD_01563 glucosamine anaerobic growth regulon transcriptional repressor; autorepressor — —
Escherichia coli ECOR27 0.79 NOLOHH_13185 glyA serine hydroxymethyltransferase 0.47 NOLOHH_18245 mlc DNA-binding transcriptional repressor Mlc low > 76
Escherichia coli ECRC100 0.79 OKFHMN_21510 glyA serine hydroxymethyltransferase 0.47 OKFHMN_27740 mlc DNA-binding transcriptional repressor Mlc low > 79
Escherichia coli BW25113 0.79 b2551 glyA serine hydroxymethyltransferase (NCBI) 0.46 b1594 dgsA DNA-binding transcriptional repressor (NCBI) — —
Escherichia coli ECRC102 0.79 NIAGMN_19280 glyA serine hydroxymethyltransferase 0.47 NIAGMN_00335 mlc DNA-binding transcriptional repressor Mlc low > 80
Escherichia coli ECRC101 0.79 MCAODC_12040 glyA serine hydroxymethyltransferase 0.47 MCAODC_17670 mlc DNA-binding transcriptional repressor Mlc — —
Escherichia coli Nissle 1917 0.79 ECOLIN_RS14440 serine hydroxymethyltransferase 0.47 ECOLIN_RS08905 sugar metabolism global transcriptional regulator Mlc — —
Escherichia fergusonii Becca 0.79 EFB2_01345 Serine hydroxymethyltransferase 0.47 EFB2_02398 Protein mlc — —
Escherichia coli ECOR38 0.79 HEPCGN_20655 glyA serine hydroxymethyltransferase 0.47 HEPCGN_06115 mlc DNA-binding transcriptional repressor Mlc low > 88
Escherichia coli ECRC98 0.79 JDDGAC_25175 glyA serine hydroxymethyltransferase 0.47 JDDGAC_02330 mlc DNA-binding transcriptional repressor Mlc — —
Escherichia coli ECRC62 0.79 BNILDI_11985 glyA serine hydroxymethyltransferase 0.47 BNILDI_17035 mlc DNA-binding transcriptional repressor Mlc low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF2447 Serine hydroxymethyltransferase (EC 2.1.2.1) 0.47 GFF1785 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon — —
Klebsiella pneumoniae MKP103 0.79 KDGMDA_28355 Serine hydroxymethyltransferase 0.48 KDGMDA_21230 transcriptional regulator low > 95
Klebsiella michiganensis M5al 0.79 BWI76_RS21225 serine hydroxymethyltransferase 0.47 BWI76_RS15955 transcriptional regulator — —
Enterobacter asburiae PDN3 0.79 EX28DRAFT_0099 Glycine/serine hydroxymethyltransferase 0.48 EX28DRAFT_1493 Transcriptional regulator/sugar kinase — —
Enterobacter sp. TBS_079 0.79 MPMX20_03420 Serine hydroxymethyltransferase 0.47 MPMX20_02063 Protein mlc — —
Dyella japonica UNC79MFTsu3.2 0.72 ABZR86_RS10715 serine hydroxymethyltransferase 0.14 ABZR86_RS19180 ROK family transcriptional regulator low > 74
Variovorax sp. OAS795 0.62 ABID97_RS17890 serine hydroxymethyltransferase 0.17 ABID97_RS00440 ROK family protein — —
Phocaeicola vulgatus CL09T03C04 0.54 HMPREF1058_RS03800 serine hydroxymethyltransferase 0.18 HMPREF1058_RS07285 ROK family transcriptional regulator low > 67
Phocaeicola dorei CL03T12C01 0.54 ABI39_RS17420 serine hydroxymethyltransferase 0.18 ABI39_RS21185 ROK family transcriptional regulator low > 72
Parabacteroides merdae CL09T00C40 0.53 HMPREF1078_RS02145 serine hydroxymethyltransferase 0.19 HMPREF1078_RS06205 ROK family transcriptional regulator low > 61
Bacteroides ovatus ATCC 8483 0.53 BACOVA_02446 glycine hydroxymethyltransferase 0.18 BACOVA_01791 hypothetical protein low > 96
Bacteroides stercoris CC31F 0.53 HMPREF1181_RS15010 serine hydroxymethyltransferase 0.17 HMPREF1181_RS04110 ROK family transcriptional regulator low > 56
Bacteroides thetaiotaomicron VPI-5482 0.53 BT0738 serine hydroxymethyltransferase (NCBI ptt file) 0.17 BT0433 putative xylose repressor (NCBI ptt file) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.50 CA264_17045 serine hydroxymethyltransferase 0.20 CA264_08710 sugar kinase low > 74

Not shown: 61 genomes with orthologs for CSW01_04820 only; 7 genomes with orthologs for CSW01_10020 only