Conservation of cofitness between CSW01_11910 and CSW01_08605 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11910 2-deoxyribose-5-phosphate aldolase 1.0 CSW01_08605 YgiQ family radical SAM protein 0.49 9
Enterobacter asburiae PDN3 0.76 EX28DRAFT_3590 deoxyribose-phosphate aldolase 0.59 EX28DRAFT_3051 uncharacterized radical SAM protein YgiQ low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF1043 Deoxyribose-phosphate aldolase (EC 4.1.2.4) 0.60 GFF3129 Probable Fe-S oxidoreductase family 2 low > 78
Escherichia coli BL21 0.76 ECD_04257 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked 0.60 ECD_02888 Radical SAM superfamily protein low > 61
Escherichia fergusonii Becca 0.76 EFB2_04065 Deoxyribose-phosphate aldolase 0.60 EFB2_00795 hypothetical protein low > 86
Escherichia coli ECOR38 0.76 HEPCGN_09235 deoC deoxyribose-phosphate aldolase 0.60 HEPCGN_17785 ygiQ YgiQ family radical SAM protein low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_03680 Deoxyribose-phosphate aldolase 0.60 OHPLBJKB_00686 hypothetical protein low > 74
Escherichia coli ECRC99 0.76 KEDOAH_16920 deoC deoxyribose-phosphate aldolase 0.60 KEDOAH_09230 ygiQ YgiQ family radical SAM protein — —
Escherichia coli Nissle 1917 0.76 ECOLIN_RS25150 deoxyribose-phosphate aldolase 0.60 ECOLIN_RS17355 YgiQ family radical SAM protein low > 55
Escherichia coli ECRC62 0.76 BNILDI_08035 deoC deoxyribose-phosphate aldolase 0.60 BNILDI_00820 ygiQ YgiQ family radical SAM protein low > 75
Escherichia coli ECOR27 0.76 NOLOHH_03565 deoC deoxyribose-phosphate aldolase 0.60 NOLOHH_10695 ygiQ YgiQ family radical SAM protein low > 76
Escherichia coli ECRC102 0.76 NIAGMN_09080 deoC deoxyribose-phosphate aldolase 0.60 NIAGMN_16680 ygiQ YgiQ family radical SAM protein low > 80
Escherichia coli ECRC100 0.76 OKFHMN_11230 deoC deoxyribose-phosphate aldolase 0.60 OKFHMN_18915 ygiQ YgiQ family radical SAM protein low > 79
Escherichia coli ECRC101 0.76 MCAODC_01745 deoC deoxyribose-phosphate aldolase 0.60 MCAODC_09430 ygiQ YgiQ family radical SAM protein low > 88
Escherichia coli ECRC98 0.76 JDDGAC_14825 deoC deoxyribose-phosphate aldolase 0.60 JDDGAC_22550 ygiQ YgiQ family radical SAM protein low > 87
Klebsiella pneumoniae MKP103 0.75 KDGMDA_12400 deoxyribose-phosphate aldolase 0.60 KDGMDA_05150 YgiQ family radical SAM protein — —
Escherichia coli BW25113 0.75 b4381 deoC deoxyribose-phosphate aldolase (NCBI) 0.60 b4469 ygiQ hypothetical protein (NCBI) low > 76
Enterobacter sp. TBS_079 0.75 MPMX20_00680 Deoxyribose-phosphate aldolase 0.59 MPMX20_03857 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.74 BWI76_RS04130 2-deoxyribose-5-phosphate aldolase 0.59 BWI76_RS24310 YgiQ family radical SAM protein low > 92
Rahnella sp. WP5 0.73 EX31_RS04065 deoxyribose-phosphate aldolase 0.59 EX31_RS04200 YgiQ family radical SAM protein low > 89
Serratia liquefaciens MT49 0.73 IAI46_02910 deoxyribose-phosphate aldolase 0.60 IAI46_21835 YgiQ family radical SAM protein low > 86
Shewanella loihica PV-4 0.67 Shew_2815 deoxyribose-phosphate aldolase (RefSeq) 0.59 Shew_0233 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.66 Shewana3_1041 deoxyribose-phosphate aldolase (RefSeq) 0.60 Shewana3_3874 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.65 SO1217 deoC deoxyribose-phosphate aldolase (NCBI ptt file) 0.61 SO0311 hypothetical Fe-S oxidoreductase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.63 Sama_0973 deoxyribose-phosphate aldolase (RefSeq) 0.60 Sama_3349 hypothetical protein (RefSeq) low > 62
Azospirillum sp. SherDot2 0.42 MPMX19_04364 Deoxyribose-phosphate aldolase 0.55 MPMX19_06038 hypothetical protein low > 112
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_0839 Deoxyribose-phosphate aldolase 0.59 Psyr_0587 Radical SAM low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_0839 Deoxyribose-phosphate aldolase 0.59 Psyr_0587 Radical SAM low > 86
Variovorax sp. SCN45 0.37 GFF4165 Deoxyribose-phosphate aldolase (EC 4.1.2.4) 0.56 GFF1034 UPF0313 [4Fe-4S] protein YgiQ — —
Bacteroides stercoris CC31F 0.31 HMPREF1181_RS02080 deoxyribose-phosphate aldolase 0.31 HMPREF1181_RS04635 YgiQ family radical SAM protein low > 56
Rhodospirillum rubrum S1H 0.18 Rru_A2303 Deoxyribose-phosphate aldolase (NCBI) 0.56 Rru_A2003 Radical SAM (NCBI) low > 58

Not shown: 16 genomes with orthologs for CSW01_11910 only; 33 genomes with orthologs for CSW01_08605 only