Conservation of cofitness between CSW01_13610 and CSW01_08465 in Vibrio cholerae E7946 ATCC 55056

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13610 membrane protein FxsA 1.0 CSW01_08465 ABC transporter ATP-binding protein 0.63 3
Shewanella oneidensis MR-1 0.44 SO0698 fsxA fxsA protein (NCBI ptt file) 0.51 SO1801 sapF peptide ABC transporter, ATP-binding protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.42 Sama_0540 FxsA cytoplasmic membrane protein (RefSeq) 0.51 Sama_1231 peptide ABC transporter, ATP-binding protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.41 MIT1002_03937 Suppressor of F exclusion of phage T7 0.38 MIT1002_01137 putative D,D-dipeptide transport ATP-binding protein DdpF
Shewanella sp. ANA-3 0.39 Shewana3_3574 FxsA cytoplasmic membrane protein (RefSeq) 0.52 Shewana3_2654 ABC transporter related (RefSeq) low > 73
Shewanella loihica PV-4 0.37 Shew_3264 FxsA cytoplasmic membrane protein (RefSeq) 0.53 Shew_2502 ABC transporter-related protein (RefSeq) low > 60
Serratia liquefaciens MT49 0.33 IAI46_01485 membrane protein FxsA 0.60 IAI46_13545 peptide ABC transporter ATP-binding protein SapF
Rahnella sp. WP5 0.32 EX31_RS08960 FxsA family protein 0.60 EX31_RS15720 peptide ABC transporter ATP-binding protein SapF
Pantoea sp. MT58 0.31 IAI47_17315 FxsA family protein 0.58 IAI47_09360 peptide ABC transporter ATP-binding protein SapF low > 76
Dickeya dadantii 3937 0.31 DDA3937_RS02725 FxsA family protein 0.55 DDA3937_RS12460 peptide ABC transporter ATP-binding protein SapF low > 74
Klebsiella michiganensis M5al 0.30 BWI76_RS02340 membrane protein FxsA 0.58 BWI76_RS12010 antimicrobial peptide ABC system ATP-binding protein
Enterobacter asburiae PDN3 0.29 EX28DRAFT_3337 Protein affecting phage T7 exclusion by the F plasmid 0.59 EX28DRAFT_0970 ABC-type antimicrobial peptide transport system, ATPase component low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF2012 FxsA protein 0.59 GFF2692 Peptide transport system ATP-binding protein SapF low > 78
Enterobacter sp. TBS_079 0.29 MPMX20_00420 hypothetical protein 0.60 MPMX20_02478 Putrescine export system ATP-binding protein SapF low > 85
Pectobacterium carotovorum WPP14 0.29 HER17_RS18830 membrane protein FxsA 0.57 HER17_RS09475 peptide ABC transporter ATP-binding protein SapF low > 75
Erwinia amylovora T8 0.29 OLJFJH_02610 exclusion suppressor FxsA 0.58 OLJFJH_13640 peptide ABC transporter ATP-binding protein SapF low > 58
Erwinia tracheiphila SCR3 0.28 LU632_RS01860 FxsA family protein 0.55 LU632_RS12610 sapF peptide ABC transporter ATP-binding protein SapF low > 73
Erwinia tracheiphila HP pepo 2.2 0.28 IJEDHG_07050 exclusion suppressor FxsA 0.55 IJEDHG_23660 sapF peptide ABC transporter ATP-binding protein SapF low > 61
Klebsiella pneumoniae MKP103 0.28 KDGMDA_10825 membrane protein FxsA 0.57 KDGMDA_19705 peptide ABC transporter ATP-binding protein SapF low > 95
Dickeya dianthicola 67-19 0.27 HGI48_RS02700 FxsA family protein 0.54 HGI48_RS12525 peptide ABC transporter ATP-binding protein SapF
Dickeya dianthicola ME23 0.27 DZA65_RS02855 FxsA family protein 0.54 DZA65_RS12975 peptide ABC transporter ATP-binding protein SapF low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_03903 hypothetical protein 0.59 OHPLBJKB_02392 Putrescine export system ATP-binding protein SapF
Escherichia coli BW25113 0.26 b4140 b4140 orf, hypothetical protein (VIMSS) 0.59 b1290 sapF predicted antimicrobial peptide transporter subunit (NCBI) low > 76
Escherichia coli BL21 0.26 ECD_04010 suppressor of F exclusion of phage T7 0.59 ECD_01267 antimicrobial peptide ABC transporter ATPase
Escherichia coli ECRC62 0.25 BNILDI_06800 fxsA membrane protein FxsA 0.59 BNILDI_18315 sapF peptide ABC transporter ATP-binding protein SapF low > 75
Escherichia coli ECOR27 0.25 NOLOHH_04690 fxsA membrane protein FxsA 0.59 NOLOHH_20165 sapF peptide ABC transporter ATP-binding protein SapF
Escherichia fergusonii Becca 0.24 EFB2_04395 hypothetical protein 0.59 EFB2_02630 Putrescine export system ATP-binding protein SapF
Escherichia coli ECRC98 0.22 JDDGAC_16060 fxsA membrane protein FxsA 0.59 JDDGAC_05025 sapF peptide ABC transporter ATP-binding protein SapF
Escherichia coli ECRC100 0.22 OKFHMN_12425 fxsA membrane protein FxsA 0.59 OKFHMN_02480 sapF peptide ABC transporter ATP-binding protein SapF
Escherichia coli ECRC102 0.22 NIAGMN_10270 fxsA membrane protein FxsA 0.59 NIAGMN_26650 sapF peptide ABC transporter ATP-binding protein SapF
Escherichia coli Nissle 1917 0.22 ECOLIN_RS24050 FxsA family protein 0.59 ECOLIN_RS07805 peptide ABC transporter ATP-binding protein SapF
Escherichia coli ECRC101 0.22 MCAODC_02935 fxsA membrane protein FxsA 0.59 MCAODC_15790 sapF peptide ABC transporter ATP-binding protein SapF
Escherichia coli ECOR38 0.22 HEPCGN_10650 fxsA membrane protein FxsA 0.59 HEPCGN_25720 sapF peptide ABC transporter ATP-binding protein SapF low > 88
Escherichia coli ECRC99 0.22 KEDOAH_15740 fxsA membrane protein FxsA 0.59 KEDOAH_26295 sapF peptide ABC transporter ATP-binding protein SapF

Not shown: 30 genomes with orthologs for CSW01_13610 only; 1 genomes with orthologs for CSW01_08465 only