Conservation of cofitness between CSW01_09600 and CSW01_08465 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09600 DNA-binding protein HU-beta 1.0 CSW01_08465 ABC transporter ATP-binding protein 0.78 3
Alteromonas macleodii MIT1002 0.81 MIT1002_02756 hypothetical protein 0.38 MIT1002_01137 putative D,D-dipeptide transport ATP-binding protein DdpF — —
Erwinia tracheiphila SCR3 0.78 LU632_RS18330 hupB DNA-binding protein HU-beta 0.55 LU632_RS12610 sapF peptide ABC transporter ATP-binding protein SapF low > 73
Shewanella oneidensis MR-1 0.76 SO1797 DNA-binding protein, HU family (NCBI ptt file) 0.51 SO1801 sapF peptide ABC transporter, ATP-binding protein (NCBI ptt file) — —
Erwinia tracheiphila HP pepo 2.2 0.76 IJEDHG_16455 hupB DNA-binding protein HU-beta 0.55 IJEDHG_23660 sapF peptide ABC transporter ATP-binding protein SapF — —
Enterobacter sp. TBS_079 0.76 MPMX20_01031 DNA-binding protein HU-beta 0.60 MPMX20_02478 Putrescine export system ATP-binding protein SapF low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS06540 DNA-binding protein HU-beta 0.58 BWI76_RS12010 antimicrobial peptide ABC system ATP-binding protein — —
Klebsiella pneumoniae MKP103 0.76 KDGMDA_14625 DNA-binding protein HU-beta 0.57 KDGMDA_19705 peptide ABC transporter ATP-binding protein SapF low > 95
Enterobacter asburiae PDN3 0.76 EX28DRAFT_2530 Bacterial nucleoid DNA-binding protein 0.59 EX28DRAFT_0970 ABC-type antimicrobial peptide transport system, ATPase component low > 76
Rahnella sp. WP5 0.75 EX31_RS22260 DNA-binding protein HU-beta 0.60 EX31_RS15720 peptide ABC transporter ATP-binding protein SapF — —
Shewanella sp. ANA-3 0.75 Shewana3_2658 histone family protein DNA-binding protein (RefSeq) 0.52 Shewana3_2654 ABC transporter related (RefSeq) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_03233 DNA-binding protein HU-beta 0.59 OHPLBJKB_02392 Putrescine export system ATP-binding protein SapF — —
Serratia liquefaciens MT49 0.75 IAI46_05025 DNA-binding protein HU-beta 0.60 IAI46_13545 peptide ABC transporter ATP-binding protein SapF — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF4356 DNA-binding protein HU-beta 0.59 GFF2692 Peptide transport system ATP-binding protein SapF low > 78
Pantoea sp. MT58 0.75 IAI47_14640 DNA-binding protein HU-beta 0.58 IAI47_09360 peptide ABC transporter ATP-binding protein SapF low > 76
Escherichia coli BL21 0.75 ECD_00392 HU, DNA-binding transcriptional regulator, beta subunit 0.59 ECD_01267 antimicrobial peptide ABC transporter ATPase — —
Escherichia coli BW25113 0.75 b0440 hupB HU, DNA-binding transcriptional regulator, beta subunit (NCBI) 0.59 b1290 sapF predicted antimicrobial peptide transporter subunit (NCBI) low > 76
Pantoea agglomerans CFBP13505 P0401 0.75 PagCFBP13505_RS10555 DNA-binding protein HU-beta 0.58 PagCFBP13505_RS06815 peptide ABC transporter ATP-binding protein SapF low > 74
Escherichia fergusonii Becca 0.75 EFB2_03617 DNA-binding protein HU-beta 0.59 EFB2_02630 Putrescine export system ATP-binding protein SapF — —
Escherichia coli Nissle 1917 0.74 ECOLIN_RS02640 nucleoid-associated protein HU-beta 0.59 ECOLIN_RS07805 peptide ABC transporter ATP-binding protein SapF — —
Shewanella loihica PV-4 0.74 Shew_2505 histone family protein DNA-binding protein (RefSeq) 0.53 Shew_2502 ABC transporter-related protein (RefSeq) — —
Escherichia coli ECOR38 0.74 HEPCGN_06930 hupB DNA-binding protein HU-beta 0.59 HEPCGN_25720 sapF peptide ABC transporter ATP-binding protein SapF low > 88
Escherichia coli ECRC99 0.74 KEDOAH_19650 hupB DNA-binding protein HU-beta 0.59 KEDOAH_26295 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECRC102 0.74 NIAGMN_06370 hupB DNA-binding protein HU-beta 0.59 NIAGMN_26650 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECRC101 0.74 MCAODC_27540 hupB DNA-binding protein HU-beta 0.59 MCAODC_15790 sapF peptide ABC transporter ATP-binding protein SapF — —
Dickeya dadantii 3937 0.74 DDA3937_RS05655 DNA-binding protein HU-beta 0.55 DDA3937_RS12460 peptide ABC transporter ATP-binding protein SapF low > 74
Escherichia coli ECOR27 0.74 NOLOHH_01250 hupB DNA-binding protein HU-beta 0.59 NOLOHH_20165 sapF peptide ABC transporter ATP-binding protein SapF — —
Dickeya dianthicola 67-19 0.74 HGI48_RS05700 DNA-binding protein HU-beta 0.54 HGI48_RS12525 peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECRC100 0.74 OKFHMN_08315 hupB DNA-binding protein HU-beta 0.59 OKFHMN_02480 sapF peptide ABC transporter ATP-binding protein SapF — —
Dickeya dianthicola ME23 0.74 DZA65_RS06025 DNA-binding protein HU-beta 0.54 DZA65_RS12975 peptide ABC transporter ATP-binding protein SapF low > 75
Escherichia coli ECRC98 0.74 JDDGAC_11970 hupB DNA-binding protein HU-beta 0.59 JDDGAC_05025 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECRC62 0.74 BNILDI_22665 hupB DNA-binding protein HU-beta 0.59 BNILDI_18315 sapF peptide ABC transporter ATP-binding protein SapF low > 75
Pectobacterium carotovorum WPP14 0.73 HER17_RS15835 DNA-binding protein HU-beta 0.57 HER17_RS09475 peptide ABC transporter ATP-binding protein SapF low > 75
Erwinia amylovora T8 0.73 OLJFJH_17955 DNA-binding protein HU-beta 0.58 OLJFJH_13640 peptide ABC transporter ATP-binding protein SapF low > 58
Shewanella amazonensis SB2B 0.72 Sama_1227 HU family DNA-binding protein (RefSeq) 0.51 Sama_1231 peptide ABC transporter, ATP-binding protein (RefSeq) — —

Not shown: 63 genomes with orthologs for CSW01_09600 only; 0 genomes with orthologs for CSW01_08465 only