Conservation of cofitness between CSW01_03175 and CSW01_08465 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03175 penicillin-binding protein 1B 1.0 CSW01_08465 ABC transporter ATP-binding protein 0.72 19
Serratia liquefaciens MT49 0.49 IAI46_21190 bifunctional glycosyl transferase/transpeptidase 0.60 IAI46_13545 peptide ABC transporter ATP-binding protein SapF — —
Pectobacterium carotovorum WPP14 0.48 HER17_RS05600 bifunctional glycosyl transferase/transpeptidase 0.57 HER17_RS09475 peptide ABC transporter ATP-binding protein SapF low > 75
Dickeya dadantii 3937 0.48 DDA3937_RS15915 bifunctional glycosyl transferase/transpeptidase 0.55 DDA3937_RS12460 peptide ABC transporter ATP-binding protein SapF low > 74
Dickeya dianthicola ME23 0.48 DZA65_RS17115 bifunctional glycosyl transferase/transpeptidase 0.54 DZA65_RS12975 peptide ABC transporter ATP-binding protein SapF low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS16030 bifunctional glycosyl transferase/transpeptidase 0.54 HGI48_RS12525 peptide ABC transporter ATP-binding protein SapF — —
Erwinia tracheiphila SCR3 0.46 LU632_RS20060 mrcB bifunctional glycosyl transferase/transpeptidase 0.55 LU632_RS12610 sapF peptide ABC transporter ATP-binding protein SapF low > 74
Pantoea agglomerans CFBP13505 P0401 0.46 PagCFBP13505_RS13390 bifunctional glycosyl transferase/transpeptidase 0.58 PagCFBP13505_RS06815 peptide ABC transporter ATP-binding protein SapF low > 74
Erwinia tracheiphila HP pepo 2.2 0.46 IJEDHG_15080 Penicillin-binding protein 1B 0.55 IJEDHG_23660 sapF peptide ABC transporter ATP-binding protein SapF low > 61
Pantoea sp. MT58 0.46 IAI47_15615 bifunctional glycosyl transferase/transpeptidase 0.58 IAI47_09360 peptide ABC transporter ATP-binding protein SapF low > 76
Klebsiella pneumoniae MKP103 0.45 KDGMDA_13365 bifunctional glycosyl transferase/transpeptidase 0.57 KDGMDA_19705 peptide ABC transporter ATP-binding protein SapF low > 95
Enterobacter sp. TBS_079 0.45 MPMX20_00835 Penicillin-binding protein 1B 0.60 MPMX20_02478 Putrescine export system ATP-binding protein SapF low > 85
Enterobacter asburiae PDN3 0.45 EX28DRAFT_3738 penicillin-binding protein 1B 0.59 EX28DRAFT_0970 ABC-type antimicrobial peptide transport system, ATPase component low > 76
Escherichia coli BL21 0.45 ECD_00148 fused glycosyl transferase and transpeptidase 0.59 ECD_01267 antimicrobial peptide ABC transporter ATPase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF83 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 0.59 GFF2692 Peptide transport system ATP-binding protein SapF low > 78
Erwinia amylovora T8 0.45 OLJFJH_00745 bifunctional glycosyl transferase/transpeptidase 0.58 OLJFJH_13640 peptide ABC transporter ATP-binding protein SapF low > 58
Escherichia coli BW25113 0.45 b0149 mrcB penicillin-binding protein 1b (NCBI) 0.59 b1290 sapF predicted antimicrobial peptide transporter subunit (NCBI) low > 76
Klebsiella michiganensis M5al 0.45 BWI76_RS05120 bifunctional glycosyl transferase/transpeptidase 0.58 BWI76_RS12010 antimicrobial peptide ABC system ATP-binding protein — —
Rahnella sp. WP5 0.45 EX31_RS03230 bifunctional glycosyl transferase/transpeptidase 0.60 EX31_RS15720 peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli Nissle 1917 0.45 ECOLIN_RS00835 bifunctional glycosyl transferase/transpeptidase 0.59 ECOLIN_RS07805 peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECOR38 0.45 HEPCGN_08275 mrcB bifunctional glycosyl transferase/transpeptidase 0.59 HEPCGN_25720 sapF peptide ABC transporter ATP-binding protein SapF low > 88
Escherichia coli ECOR27 0.45 NOLOHH_02670 mrcB bifunctional glycosyl transferase/transpeptidase 0.59 NOLOHH_20165 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECRC101 0.45 MCAODC_00840 mrcB bifunctional glycosyl transferase/transpeptidase 0.59 MCAODC_15790 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECRC99 0.45 KEDOAH_17830 mrcB bifunctional glycosyl transferase/transpeptidase 0.59 KEDOAH_26295 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECRC62 0.45 BNILDI_09000 mrcB bifunctional glycosyl transferase/transpeptidase 0.59 BNILDI_18315 sapF peptide ABC transporter ATP-binding protein SapF low > 75
Escherichia fergusonii Becca 0.45 EFB2_03895 Penicillin-binding protein 1B 0.59 EFB2_02630 Putrescine export system ATP-binding protein SapF — —
Escherichia coli ECRC102 0.45 NIAGMN_08175 mrcB bifunctional glycosyl transferase/transpeptidase 0.59 NIAGMN_26650 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECRC98 0.45 JDDGAC_13920 mrcB bifunctional glycosyl transferase/transpeptidase 0.59 JDDGAC_05025 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECRC100 0.45 OKFHMN_10325 mrcB bifunctional glycosyl transferase/transpeptidase 0.59 OKFHMN_02480 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_03513 Penicillin-binding protein 1B 0.59 OHPLBJKB_02392 Putrescine export system ATP-binding protein SapF — —
Shewanella amazonensis SB2B 0.43 Sama_2971 peptidoglycan glycosyltransferase (RefSeq) 0.51 Sama_1231 peptide ABC transporter, ATP-binding protein (RefSeq) low > 62
Shewanella loihica PV-4 0.43 Shew_3123 penicillin-binding protein 1B (RefSeq) 0.53 Shew_2502 ABC transporter-related protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.43 SO0633 mrcB penicillin-binding protein 1B (NCBI ptt file) 0.51 SO1801 sapF peptide ABC transporter, ATP-binding protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.43 Shewana3_0623 penicillin-binding protein 1B (RefSeq) 0.52 Shewana3_2654 ABC transporter related (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.41 MIT1002_00409 Murein polymerase 0.38 MIT1002_01137 putative D,D-dipeptide transport ATP-binding protein DdpF — —

Not shown: 31 genomes with orthologs for CSW01_03175 only; 0 genomes with orthologs for CSW01_08465 only