Conservation of cofitness between CSW01_11780 and CSW01_05935 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11780 exodeoxyribonuclease V subunit beta 1.0 CSW01_05935 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 0.80 14
Pantoea sp. MT58 0.41 IAI47_03965 exodeoxyribonuclease V subunit beta 0.58 IAI47_09175 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Pantoea agglomerans CFBP13505 P0401 0.40 PagCFBP13505_RS17000 exodeoxyribonuclease V subunit beta 0.58 PagCFBP13505_RS07010 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Erwinia amylovora T8 0.40 OLJFJH_09100 exodeoxyribonuclease V subunit beta 0.57 OLJFJH_13480 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF1301 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) 0.59 GFF2724 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) — —
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2895 DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) 0.57 EX28DRAFT_0934 indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Serratia liquefaciens MT49 0.40 IAI46_20405 exodeoxyribonuclease V subunit beta 0.60 IAI46_14035 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Enterobacter sp. TBS_079 0.40 MPMX20_03683 RecBCD enzyme subunit RecB 0.58 MPMX20_02512 Tryptophan biosynthesis protein TrpCF low > 85
Pectobacterium carotovorum WPP14 0.40 HER17_RS16525 exodeoxyribonuclease V subunit beta 0.57 HER17_RS10930 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 75
Erwinia tracheiphila HP pepo 2.2 0.39 IJEDHG_17205 recB exodeoxyribonuclease V subunit beta 0.58 IJEDHG_23495 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Klebsiella pneumoniae MKP103 0.39 KDGMDA_03810 exodeoxyribonuclease V subunit beta 0.57 KDGMDA_19555 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 95
Erwinia tracheiphila SCR3 0.39 LU632_RS06190 recB exodeoxyribonuclease V subunit beta 0.58 LU632_RS12765 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Klebsiella michiganensis M5al 0.39 BWI76_RS23230 exodeoxyribonuclease V subunit beta 0.58 BWI76_RS11850 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 0.35 84
Escherichia coli BL21 0.39 ECD_02668 exonuclease V (RecBCD complex), beta subunit 0.58 ECD_01236 indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase — —
Escherichia coli BW25113 0.39 b2820 recB exonuclease V (RecBCD complex), beta subunit (NCBI) 0.58 b1262 trpC N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase (VIMSS) low > 76
Escherichia coli ECRC62 0.39 BNILDI_10415 recB exodeoxyribonuclease V subunit beta 0.58 BNILDI_18470 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00910 RecBCD enzyme subunit RecB 0.58 OHPLBJKB_02421 Tryptophan biosynthesis protein TrpCF — —
Escherichia coli ECOR38 0.39 HEPCGN_19305 recB exodeoxyribonuclease V subunit beta 0.58 HEPCGN_25525 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.47 49
Escherichia coli ECOR27 0.39 NOLOHH_11935 recB exodeoxyribonuclease V subunit beta 0.58 NOLOHH_20325 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD — —
Escherichia fergusonii Becca 0.38 EFB2_01064 RecBCD enzyme subunit RecB 0.58 EFB2_02664 Tryptophan biosynthesis protein TrpCF low > 86
Escherichia coli Nissle 1917 0.38 ECOLIN_RS15830 exodeoxyribonuclease V subunit beta 0.58 ECOLIN_RS07605 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC100 0.38 OKFHMN_20050 recB exodeoxyribonuclease V subunit beta 0.57 OKFHMN_02665 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC102 0.38 NIAGMN_17820 recB exodeoxyribonuclease V subunit beta 0.57 NIAGMN_26835 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC98 0.38 JDDGAC_23715 recB exodeoxyribonuclease V subunit beta 0.57 JDDGAC_05210 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC101 0.38 MCAODC_10575 recB exodeoxyribonuclease V subunit beta 0.57 MCAODC_15600 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC99 0.38 KEDOAH_08080 recB exodeoxyribonuclease V subunit beta 0.57 KEDOAH_26085 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Dickeya dianthicola 67-19 0.31 HGI48_RS11100 exodeoxyribonuclease V subunit beta 0.58 HGI48_RS10470 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Shewanella loihica PV-4 0.30 Shew_2130 exodeoxyribonuclease V, beta subunit (RefSeq) 0.49 Shew_2254 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) — —
Dickeya dadantii 3937 0.30 DDA3937_RS11080 exodeoxyribonuclease V subunit beta 0.59 DDA3937_RS10470 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 74
Dickeya dianthicola ME23 0.30 DZA65_RS11480 exodeoxyribonuclease V subunit beta 0.58 DZA65_RS10950 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Rahnella sp. WP5 0.29 EX31_RS20735 exodeoxyribonuclease V subunit beta 0.58 EX31_RS09970 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.69 61
Shewanella amazonensis SB2B 0.29 Sama_1901 exodeoxyribonuclease V, beta subunit (RefSeq) 0.50 Sama_2132 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) — —
Shewanella sp. ANA-3 0.28 Shewana3_2246 exodeoxyribonuclease V, beta subunit (RefSeq) 0.43 Shewana3_1517 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) — —
Shewanella oneidensis MR-1 0.28 SO2148 recB exodeoxyribonuclease V, beta subunit (NCBI ptt file) 0.41 SO3022 trpC/F indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.21 MIT1002_02360 Exodeoxyribonuclease V beta chain 0.52 MIT1002_01427 Tryptophan biosynthesis protein TrpCF — —

Not shown: 34 genomes with orthologs for CSW01_11780 only; 1 genomes with orthologs for CSW01_05935 only