Conservation of cofitness between CSW01_06225 and CSW01_05825 in Vibrio cholerae E7946 ATCC 55056

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06225 cytidine deaminase 1.0 CSW01_05825 transcriptional regulator HexR 0.63 10
Rahnella sp. WP5 0.44 EX31_RS18660 cytidine deaminase 0.76 EX31_RS10635 MurR/RpiR family transcriptional regulator low > 89
Serratia liquefaciens MT49 0.43 IAI46_07940 cytidine deaminase 0.78 IAI46_14580 MurR/RpiR family transcriptional regulator low > 87
Pectobacterium carotovorum WPP14 0.42 HER17_RS13485 cytidine deaminase 0.77 HER17_RS11785 MurR/RpiR family transcriptional regulator low > 75
Pantoea sp. MT58 0.42 IAI47_06760 cytidine deaminase 0.63 IAI47_08490 MurR/RpiR family transcriptional regulator low > 76
Erwinia tracheiphila SCR3 0.42 LU632_RS08555 cdd cytidine deaminase 0.64 LU632_RS13365 MurR/RpiR family transcriptional regulator low > 73
Erwinia tracheiphila HP pepo 2.2 0.42 IJEDHG_18665 cdd cytidine deaminase 0.64 IJEDHG_22185 transcriptional regulator HexR 0.66 19
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF3795 Cytidine deaminase (EC 3.5.4.5) 0.72 GFF1632 Phosphogluconate repressor HexR, RpiR family low > 78
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0412 cytidine deaminase (EC 3.5.4.5) 0.74 EX28DRAFT_0703 transcriptional regulator, RpiR family low > 76
Escherichia coli Nissle 1917 0.40 ECOLIN_RS12545 cytidine deaminase 0.73 ECOLIN_RS10325 DNA-binding transcriptional regulator HexR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01568 Cytidine deaminase 0.73 OHPLBJKB_01875 HTH-type transcriptional regulator HexR low > 74
Escherichia fergusonii Becca 0.40 EFB2_01713 Cytidine deaminase 0.73 EFB2_02089 HTH-type transcriptional regulator HexR low > 86
Escherichia coli ECOR27 0.40 NOLOHH_15140 cdd cytidine deaminase 0.73 NOLOHH_16840 hexR DNA-binding transcriptional regulator HexR low > 76
Escherichia coli BW25113 0.40 b2143 cdd cytidine deaminase (NCBI) 0.73 b1853 yebK predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC62 0.40 BNILDI_14060 cdd cytidine deaminase 0.73 BNILDI_15635 hexR DNA-binding transcriptional regulator HexR low > 75
Escherichia coli BL21 0.40 ECD_02072 cytidine/deoxycytidine deaminase 0.73 ECD_01824 putative DNA-binding transcriptional regulator low > 61
Pantoea agglomerans CFBP13505 P0401 0.40 PagCFBP13505_RS00860 cytidine deaminase 0.61 PagCFBP13505_RS02370 transcriptional regulator HexR low > 74
Escherichia coli ECOR38 0.40 HEPCGN_22835 cdd cytidine deaminase 0.73 HEPCGN_04730 hexR DNA-binding transcriptional regulator HexR low > 88
Escherichia coli ECRC99 0.40 KEDOAH_04615 cdd cytidine deaminase 0.73 KEDOAH_01780 hexR DNA-binding transcriptional regulator HexR — —
Escherichia coli ECRC101 0.40 MCAODC_14620 cdd cytidine deaminase 0.73 MCAODC_19080 hexR DNA-binding transcriptional regulator HexR low > 87
Enterobacter sp. TBS_079 0.40 MPMX20_03115 Cytidine deaminase 0.74 MPMX20_02758 HTH-type transcriptional regulator HexR low > 85
Escherichia coli ECRC100 0.40 OKFHMN_23570 cdd cytidine deaminase 0.73 OKFHMN_26325 hexR DNA-binding transcriptional regulator HexR low > 79
Escherichia coli ECRC102 0.40 NIAGMN_21335 cdd cytidine deaminase 0.73 NIAGMN_01735 hexR DNA-binding transcriptional regulator HexR low > 80
Dickeya dadantii 3937 0.39 DDA3937_RS08485 cytidine deaminase 0.75 DDA3937_RS10130 MurR/RpiR family transcriptional regulator low > 74
Escherichia coli ECRC98 0.39 JDDGAC_27525 cdd cytidine deaminase 0.73 JDDGAC_00900 hexR DNA-binding transcriptional regulator HexR low > 87
Shewanella loihica PV-4 0.39 Shew_1610 cytidine deaminase (RefSeq) 0.78 Shew_2049 DNA-binding transcriptional regulator HexR (RefSeq) low > 60
Klebsiella michiganensis M5al 0.39 BWI76_RS19610 Cytidine deaminase (EC 3.5.4.5) (from data) 0.72 BWI76_RS18110 transcriptional regulator HexR low > 92
Klebsiella pneumoniae MKP103 0.39 KDGMDA_26590 cytidine deaminase 0.72 KDGMDA_25375 transcriptional regulator HexR low > 95
Dickeya dianthicola ME23 0.39 DZA65_RS08940 cytidine deaminase 0.75 DZA65_RS10575 MurR/RpiR family transcriptional regulator low > 75
Dickeya dianthicola 67-19 0.39 HGI48_RS08650 cytidine deaminase 0.75 HGI48_RS10160 MurR/RpiR family transcriptional regulator low > 71
Shewanella sp. ANA-3 0.38 Shewana3_2573 Cytidine deaminase (EC 3.5.4.5) (from data) 0.77 Shewana3_2152 DNA-binding transcriptional regulator HexR (RefSeq) low > 73
Shewanella amazonensis SB2B 0.37 Sama_1974 Cytidine deaminase (EC 3.5.4.5) (from data) 0.77 Sama_1813 DNA-binding transcriptional regulator HexR (RefSeq) low > 62
Shewanella oneidensis MR-1 0.37 SO2791 cdd Cytidine deaminase (EC 3.5.4.5) (from data) 0.77 SO2490 transcriptional regulator, RpiR family (NCBI ptt file) low > 76

Not shown: 1 genomes with orthologs for CSW01_06225 only; 47 genomes with orthologs for CSW01_05825 only