Conservation of cofitness between CSW01_05125 and CSW01_05585 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05125 ribonuclease T 1.0 CSW01_05585 DUF412 domain-containing protein 0.54 4
Shewanella loihica PV-4 0.62 Shew_1520 ribonuclease T (RefSeq) 0.36 Shew_2392 hypothetical protein (RefSeq) — —
Shewanella amazonensis SB2B 0.61 Sama_2093 ribonuclease T (RefSeq) 0.37 Sama_1496 hypothetical protein (RefSeq) — —
Shewanella oneidensis MR-1 0.61 SO2755 rnt ribonuclease T (NCBI ptt file) 0.38 SO2914 conserved hypothetical protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.61 Shewana3_2540 ribonuclease T (RefSeq) 0.38 Shewana3_1553 hypothetical protein (RefSeq) — —
Rahnella sp. WP5 0.60 EX31_RS13815 ribonuclease T 0.46 EX31_RS19470 DUF412 domain-containing protein low > 89
Enterobacter sp. TBS_079 0.60 MPMX20_01984 Ribonuclease T 0.44 MPMX20_03225 hypothetical protein low > 85
Pectobacterium carotovorum WPP14 0.60 HER17_RS09255 ribonuclease T 0.46 HER17_RS07090 DUF412 domain-containing protein — —
Enterobacter asburiae PDN3 0.60 EX28DRAFT_1650 ribonuclease T 0.44 EX28DRAFT_0314 Uncharacterized protein conserved in bacteria low > 76
Escherichia coli BW25113 0.60 b1652 rnt ribonuclease T (NCBI) 0.44 b2295 yfbV hypothetical protein (NCBI) — —
Escherichia coli ECRC100 0.59 OKFHMN_27425 rnt ribonuclease T 0.44 OKFHMN_22800 yfbV UPF0208 membrane protein YfbV — —
Escherichia coli Nissle 1917 0.59 ECOLIN_RS09210 ribonuclease T 0.44 ECOLIN_RS13320 terminus macrodomain insulation protein YfbV — —
Escherichia coli BL21 0.59 ECD_01622 RNase T; exoribonuclease T; structured DNA 3 0.44 ECD_02220 UPF0208 family inner membrane protein — —
Escherichia coli ECOR38 0.59 HEPCGN_05810 rnt ribonuclease T 0.44 HEPCGN_22005 yfbV UPF0208 membrane protein YfbV — —
Escherichia coli ECOR27 0.59 NOLOHH_17945 rnt ribonuclease T 0.44 NOLOHH_14420 yfbV UPF0208 membrane protein YfbV — —
Escherichia coli ECRC99 0.59 KEDOAH_00685 rnt ribonuclease T 0.44 KEDOAH_05395 yfbV UPF0208 membrane protein YfbV — —
Escherichia coli ECRC62 0.59 BNILDI_16735 rnt ribonuclease T 0.44 BNILDI_13340 yfbV UPF0208 membrane protein YfbV — —
Escherichia fergusonii Becca 0.59 EFB2_02340 Ribonuclease T 0.44 EFB2_01563 hypothetical protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_02073 Ribonuclease T 0.44 OHPLBJKB_01410 hypothetical protein — —
Escherichia coli ECRC101 0.59 MCAODC_17985 rnt ribonuclease T 0.44 MCAODC_13840 yfbV UPF0208 membrane protein YfbV — —
Escherichia coli ECRC102 0.59 NIAGMN_00640 rnt ribonuclease T 0.44 NIAGMN_20570 yfbV UPF0208 membrane protein YfbV — —
Escherichia coli ECRC98 0.59 JDDGAC_02015 rnt ribonuclease T 0.44 JDDGAC_26765 yfbV UPF0208 membrane protein YfbV — —
Dickeya dianthicola 67-19 0.59 HGI48_RS12665 ribonuclease T 0.48 HGI48_RS14345 DUF412 domain-containing protein — —
Dickeya dianthicola ME23 0.59 DZA65_RS13120 ribonuclease T 0.49 DZA65_RS15270 DUF412 domain-containing protein low > 75
Serratia liquefaciens MT49 0.59 IAI46_11265 ribonuclease T 0.44 IAI46_17745 DUF412 domain-containing protein low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF3622 Ribonuclease T (EC 3.1.13.-) 0.44 GFF1899 FIG00638298: membrane protein YfbV — —
Alteromonas macleodii MIT1002 0.59 MIT1002_01242 Ribonuclease T 0.49 MIT1002_01839 hypothetical protein low > 70
Dickeya dadantii 3937 0.59 DDA3937_RS12605 ribonuclease T 0.48 DDA3937_RS14370 DUF412 domain-containing protein — —
Klebsiella michiganensis M5al 0.58 BWI76_RS16485 ribonuclease T 0.45 BWI76_RS20230 hypothetical protein low > 92
Klebsiella pneumoniae MKP103 0.58 KDGMDA_23430 ribonuclease T 0.43 KDGMDA_27105 UPF0208 membrane protein KPN78578_26420 low > 94
Klebsiella pneumoniae MRSN742743 0.58 GJGHJB_02190 rnt ribonuclease T 0.43 GJGHJB_01481 yfbV terminus macrodomain insulation protein YfbV — —
Pantoea sp. MT58 0.57 IAI47_10775 ribonuclease T 0.44 IAI47_06330 DUF412 domain-containing protein low > 76
Pantoea agglomerans CFBP13505 P0401 0.56 PagCFBP13516_RS10940 rnt ribonuclease T 0.43 PagCFBP13516_RS06540 yfbV terminus macrodomain insulation protein YfbV low > 80
Erwinia amylovora T8 0.54 OLJFJH_14495 ribonuclease T 0.44 OLJFJH_11370 DUF412 domain-containing protein low > 58
Erwinia tracheiphila SCR3 0.52 LU632_RS11220 rnt ribonuclease T 0.45 LU632_RS07930 DUF412 domain-containing protein low > 73
Erwinia tracheiphila HP pepo 2.2 0.52 IJEDHG_25130 rnt ribonuclease T 0.45 IJEDHG_17995 DUF412 domain-containing protein low > 61

Not shown: 32 genomes with orthologs for CSW01_05125 only; 0 genomes with orthologs for CSW01_05585 only