Conservation of cofitness between CSW01_09930 and CSW01_05280 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09930 ATP-dependent DNA helicase 1.0 CSW01_05280 uridine kinase 0.59 16
Rahnella sp. WP5 0.64 EX31_RS10615 ATP-dependent DNA helicase 0.77 EX31_RS11545 uridine kinase low > 89
Serratia liquefaciens MT49 0.64 IAI46_14550 ATP-dependent DNA helicase 0.76 IAI46_07975 uridine kinase low > 87
Enterobacter asburiae PDN3 0.63 EX28DRAFT_0750 Rad3-related DNA helicases 0.76 EX28DRAFT_0488 uridine kinase (EC 2.7.1.48) low > 76
Dickeya dadantii 3937 0.63 DDA3937_RS11240 ATP-dependent DNA helicase 0.75 DDA3937_RS06690 uridine kinase low > 74
Escherichia coli ECRC98 0.63 JDDGAC_01155 yoaA putative ATP-dependent DNA helicase YoaA 0.78 JDDGAC_28380 udk uridine kinase low > 87
Escherichia coli ECRC102 0.63 NIAGMN_01485 yoaA putative ATP-dependent DNA helicase YoaA 0.78 NIAGMN_22215 udk uridine kinase low > 80
Escherichia coli Nissle 1917 0.63 ECOLIN_RS10055 ATP-dependent DNA helicase 0.78 ECOLIN_RS12160 uridine kinase — —
Escherichia coli ECOR27 0.63 NOLOHH_17100 yoaA putative ATP-dependent DNA helicase YoaA 0.78 NOLOHH_15610 udk uridine kinase low > 75
Escherichia coli ECRC99 0.63 KEDOAH_01530 yoaA putative ATP-dependent DNA helicase YoaA 0.78 KEDOAH_03880 udk uridine kinase — —
Escherichia coli ECRC101 0.63 MCAODC_18830 yoaA putative ATP-dependent DNA helicase YoaA 0.78 MCAODC_20670 udk uridine kinase low > 87
Escherichia coli ECRC100 0.63 OKFHMN_26580 yoaA putative ATP-dependent DNA helicase YoaA 0.78 OKFHMN_24270 udk uridine kinase low > 79
Escherichia coli BL21 0.63 ECD_01778 putative ATP-dependent helicase, DinG family 0.78 ECD_01972 uridine/cytidine kinase — —
Escherichia coli ECOR38 0.63 HEPCGN_04970 yoaA putative ATP-dependent DNA helicase YoaA 0.78 HEPCGN_02970 udk uridine kinase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_01925 putative ATP-dependent helicase DinG 0.78 OHPLBJKB_01640 Uridine kinase 0.50 43
Escherichia coli ECRC62 0.63 BNILDI_15885 yoaA putative ATP-dependent DNA helicase YoaA 0.78 BNILDI_14520 udk uridine kinase low > 75
Escherichia fergusonii Becca 0.63 EFB2_02192 putative ATP-dependent DNA helicase YoaA 0.78 EFB2_01788 Uridine kinase low > 86
Escherichia coli BW25113 0.63 b1808 yoaA conserved protein with nucleoside triphosphate hydrolase domain (NCBI) 0.78 b2066 udk uridine/cytidine kinase (VIMSS) low > 76
Dickeya dianthicola 67-19 0.63 HGI48_RS11275 ATP-dependent DNA helicase 0.75 HGI48_RS06705 uridine kinase low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF2823 DinG family ATP-dependent helicase YoaA 0.77 GFF3861 Uridine kinase (EC 2.7.1.48) [C1] low > 78
Dickeya dianthicola ME23 0.63 DZA65_RS11620 ATP-dependent DNA helicase 0.75 DZA65_RS07060 uridine kinase low > 75
Enterobacter sp. TBS_079 0.63 MPMX20_02714 putative ATP-dependent DNA helicase YoaA 0.76 MPMX20_03048 Uridine kinase low > 85
Pantoea sp. MT58 0.63 IAI47_08820 ATP-dependent DNA helicase 0.75 IAI47_06905 uridine kinase low > 76
Pectobacterium carotovorum WPP14 0.63 HER17_RS11290 ATP-dependent DNA helicase 0.75 HER17_RS14650 uridine kinase low > 75
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13516_RS08955 ATP-dependent DNA helicase 0.74 PagCFBP13516_RS07280 udk uridine kinase low > 80
Klebsiella pneumoniae MRSN742743 0.63 GJGHJB_01852 dinG DNA 5'-3' helicase 0.76 GJGHJB_01649 udk uridine kinase low > 83
Erwinia amylovora T8 0.63 OLJFJH_13085 ATP-dependent helicase 0.76 OLJFJH_12000 uridine kinase low > 58
Klebsiella pneumoniae MKP103 0.62 KDGMDA_25135 ATP-dependent helicase 0.76 KDGMDA_26260 uridine kinase low > 94
Klebsiella michiganensis M5al 0.62 BWI76_RS17815 ATP-dependent helicase 0.75 BWI76_RS19125 uridine kinase — —
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_22440 ATP-dependent helicase 0.70 IJEDHG_18840 udk uridine kinase low > 61
Erwinia tracheiphila SCR3 0.61 LU632_RS13150 ATP-dependent DNA helicase 0.74 LU632_RS08740 udk uridine kinase low > 73
Alteromonas macleodii MIT1002 0.53 MIT1002_02593 putative ATP-dependent helicase DinG 0.51 MIT1002_03498 Uridine kinase low > 70
Shewanella sp. ANA-3 0.43 Shewana3_1859 helicase c2 (RefSeq) 0.76 Shewana3_1762 uridine kinase (RefSeq) — —
Shewanella oneidensis MR-1 0.43 SO2081 ATP-dependent helicase, DinG family (NCBI ptt file) 0.76 SO2617 udk uridine kinase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.40 Shew_2196 helicase c2 (RefSeq) 0.76 Shew_1575 uridine kinase (RefSeq) 0.35 38
Shewanella amazonensis SB2B 0.39 Sama_1940 ATP-dependent helicase DinG (RefSeq) 0.77 Sama_2047 uridine kinase (RefSeq) low > 62

Not shown: 26 genomes with orthologs for CSW01_09930 only; 9 genomes with orthologs for CSW01_05280 only