Conservation of cofitness between CSW01_11905 and CSW01_05045 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11905 thymidine phosphorylase 1.0 CSW01_05045 dipeptide/tripeptide permease DtpA 0.50 8
Klebsiella michiganensis M5al 0.70 BWI76_RS04135 thymidine phosphorylase 0.54 BWI76_RS16390 dipeptide/tripeptide permease A low > 92
Pantoea sp. MT58 0.70 IAI47_03405 thymidine phosphorylase 0.55 IAI47_10500 dipeptide/tripeptide permease DtpA low > 76
Serratia liquefaciens MT49 0.70 IAI46_02915 thymidine phosphorylase 0.54 IAI46_11450 dipeptide/tripeptide permease DtpA low > 86
Enterobacter asburiae PDN3 0.70 EX28DRAFT_3591 thymidine phosphorylase (EC 2.4.2.4) 0.56 EX28DRAFT_1630 amino acid/peptide transporter (Peptide:H+ symporter), bacterial low > 76
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS16300 thymidine phosphorylase 0.55 PagCFBP13505_RS05630 dipeptide/tripeptide permease DtpA low > 74
Enterobacter sp. TBS_079 0.69 MPMX20_00681 Thymidine phosphorylase 0.56 MPMX20_02004 Dipeptide and tripeptide permease A low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF1044 Thymidine phosphorylase (EC 2.4.2.4) 0.56 GFF3640 Di/tripeptide permease DtpA low > 78
Rahnella sp. WP5 0.69 EX31_RS04060 thymidine phosphorylase 0.55 EX31_RS15730 dipeptide/tripeptide permease DtpA low > 89
Escherichia coli ECRC98 0.68 JDDGAC_14820 deoA thymidine phosphorylase 0.55 JDDGAC_02105 dtpA dipeptide/tripeptide permease DtpA low > 87
Escherichia coli BW25113 0.68 b4382 deoA thymidine phosphorylase (NCBI) 0.55 b1634 tppB putative tripeptide transporter permease (NCBI) low > 76
Escherichia coli ECRC100 0.68 OKFHMN_11225 deoA thymidine phosphorylase 0.55 OKFHMN_27515 dtpA dipeptide/tripeptide permease DtpA low > 79
Escherichia coli ECOR38 0.68 HEPCGN_09230 deoA thymidine phosphorylase 0.55 HEPCGN_05900 dtpA dipeptide/tripeptide permease DtpA low > 88
Klebsiella pneumoniae MKP103 0.68 KDGMDA_12405 thymidine phosphorylase 0.55 KDGMDA_23335 dipeptide/tripeptide permease DtpA low > 95
Escherichia coli BL21 0.68 ECD_04258 thymidine phosphorylase 0.55 ECD_01604 dipeptide and tripeptide permease A low > 61
Escherichia coli ECRC99 0.68 KEDOAH_16925 deoA thymidine phosphorylase 0.55 KEDOAH_00590 dtpA dipeptide/tripeptide permease DtpA — —
Escherichia coli Nissle 1917 0.68 ECOLIN_RS25155 thymidine phosphorylase 0.55 ECOLIN_RS09120 dipeptide/tripeptide permease DtpA low > 55
Escherichia coli ECRC101 0.68 MCAODC_01740 deoA thymidine phosphorylase 0.55 MCAODC_17895 dtpA dipeptide/tripeptide permease DtpA low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03679 Thymidine phosphorylase 0.55 OHPLBJKB_02091 Dipeptide and tripeptide permease A low > 74
Escherichia coli ECOR27 0.68 NOLOHH_03555 deoA thymidine phosphorylase 0.55 NOLOHH_18035 dtpA dipeptide/tripeptide permease DtpA low > 76
Escherichia coli ECRC62 0.68 BNILDI_08040 deoA thymidine phosphorylase 0.55 BNILDI_16825 dtpA dipeptide/tripeptide permease DtpA low > 75
Escherichia fergusonii Becca 0.68 EFB2_04064 Thymidine phosphorylase 0.55 EFB2_02358 Dipeptide and tripeptide permease A low > 86
Escherichia coli ECRC102 0.68 NIAGMN_09075 deoA thymidine phosphorylase 0.55 NIAGMN_00550 dtpA dipeptide/tripeptide permease DtpA low > 80
Shewanella loihica PV-4 0.68 Shew_2814 deoA thymidine phosphorylase (RefSeq) 0.19 Shew_1397 amino acid/peptide transporter (RefSeq) low > 60
Pectobacterium carotovorum WPP14 0.68 HER17_RS18130 thymidine phosphorylase 0.55 HER17_RS10865 dipeptide/tripeptide permease DtpA low > 75
Shewanella oneidensis MR-1 0.66 SO1218 deoA thymidine phosphorylase (NCBI ptt file) 0.31 SO1277 proton-dependent oligopeptide transporter (POT) family protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.65 Sama_0974 deoA thymidine phosphorylase (RefSeq) 0.32 Sama_1177 proton-dependent oligopeptide transporter (POT) family protein (RefSeq) low > 62
Erwinia amylovora T8 0.65 OLJFJH_01620 thymidine phosphorylase 0.54 OLJFJH_14410 dipeptide/tripeptide permease DtpA low > 58
Shewanella sp. ANA-3 0.64 Shewana3_1042 deoA thymidine phosphorylase (RefSeq) 0.32 Shewana3_3089 amino acid/peptide transporter (RefSeq) 0.26 70
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS13930 thymidine phosphorylase 0.34 LRK54_RS04030 oligopeptide:H+ symporter low > 59
Rhodanobacter sp000427505 FW510-R12 0.39 LRK53_RS14680 thymidine phosphorylase 0.33 LRK53_RS05875 oligopeptide:H+ symporter low > 59

Not shown: 12 genomes with orthologs for CSW01_11905 only; 24 genomes with orthologs for CSW01_05045 only