Conservation of cofitness between CSW01_08425 and CSW01_04820 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08425 envelope stress response membrane protein PspC 1.0 CSW01_04820 serine hydroxymethyltransferase 0.58 10
Shewanella oneidensis MR-1 0.38 SO1809 pspC phage shock protein C (NCBI ptt file) 0.83 SO3471 glyA serine hydroxymethyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.38 Shewana3_2646 phage shock protein C, PspC (RefSeq) 0.83 Shewana3_1094 glyA serine hydroxymethyltransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.36 Sama_1239 phage shock protein C (RefSeq) 0.82 Sama_1014 glyA serine hydroxymethyltransferase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.36 MIT1002_01145 Phage shock protein C 0.73 MIT1002_02702 Serine hydroxymethyltransferase low > 70
Shewanella loihica PV-4 0.33 Shew_2494 phage shock protein C, PspC (RefSeq) 0.81 Shew_1185 glyA serine hydroxymethyltransferase (RefSeq) low > 60
Erwinia amylovora T8 0.32 OLJFJH_13685 envelope stress response membrane protein PspC 0.79 OLJFJH_10340 Serine hydroxymethyltransferase — —
Serratia liquefaciens MT49 0.31 IAI46_13490 envelope stress response membrane protein PspC 0.81 IAI46_19395 serine hydroxymethyltransferase — —
Escherichia coli BL21 0.30 ECD_01283 psp operon transcription co-activator 0.79 ECD_02443 serine hydroxymethyltransferase — —
Escherichia coli BW25113 0.30 b1306 pspC DNA-binding transcriptional activator (NCBI) 0.79 b2551 glyA serine hydroxymethyltransferase (NCBI) — —
Escherichia fergusonii Becca 0.30 EFB2_02621 Phage shock protein C 0.79 EFB2_01345 Serine hydroxymethyltransferase — —
Escherichia coli ECRC102 0.30 NIAGMN_26570 pspC envelope stress response membrane protein PspC 0.79 NIAGMN_19280 glyA serine hydroxymethyltransferase — —
Escherichia coli ECRC101 0.30 MCAODC_15870 pspC envelope stress response membrane protein PspC 0.79 MCAODC_12040 glyA serine hydroxymethyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_02376 Phage shock protein C 0.79 OHPLBJKB_01156 Serine hydroxymethyltransferase low > 74
Escherichia coli Nissle 1917 0.30 ECOLIN_RS07860 envelope stress response membrane protein PspC 0.79 ECOLIN_RS14440 serine hydroxymethyltransferase — —
Escherichia coli ECOR27 0.30 NOLOHH_20085 pspC envelope stress response membrane protein PspC 0.79 NOLOHH_13185 glyA serine hydroxymethyltransferase low > 75
Escherichia coli ECRC100 0.30 OKFHMN_02400 pspC envelope stress response membrane protein PspC 0.79 OKFHMN_21510 glyA serine hydroxymethyltransferase — —
Escherichia coli ECRC99 0.30 KEDOAH_26375 pspC envelope stress response membrane protein PspC 0.79 KEDOAH_06710 glyA serine hydroxymethyltransferase — —
Escherichia coli ECRC62 0.30 BNILDI_18235 pspC envelope stress response membrane protein PspC 0.79 BNILDI_11985 glyA serine hydroxymethyltransferase low > 75
Escherichia coli ECRC98 0.30 JDDGAC_04945 pspC envelope stress response membrane protein PspC 0.79 JDDGAC_25175 glyA serine hydroxymethyltransferase — —
Escherichia coli ECOR38 0.30 HEPCGN_25800 pspC envelope stress response membrane protein PspC 0.79 HEPCGN_20655 glyA serine hydroxymethyltransferase low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF2684 Phage shock protein C 0.79 GFF2447 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Dickeya dadantii 3937 0.30 DDA3937_RS12415 envelope stress response membrane protein PspC 0.81 DDA3937_RS15600 serine hydroxymethyltransferase — —
Pectobacterium carotovorum WPP14 0.29 HER17_RS09530 envelope stress response membrane protein PspC 0.81 HER17_RS05950 serine hydroxymethyltransferase — —
Rahnella sp. WP5 0.29 EX31_RS15675 envelope stress response membrane protein PspC 0.80 EX31_RS20585 serine hydroxymethyltransferase — —
Pantoea sp. MT58 0.29 IAI47_09405 envelope stress response membrane protein PspC 0.81 IAI47_04960 serine hydroxymethyltransferase — —
Erwinia tracheiphila HP pepo 2.2 0.28 IJEDHG_23030 pspC envelope stress response membrane protein PspC 0.80 IJEDHG_02915 Serine hydroxymethyltransferase 1 — —
Erwinia tracheiphila SCR3 0.28 LU632_RS11550 pspC envelope stress response membrane protein PspC 0.80 LU632_RS17915 serine hydroxymethyltransferase — —
Dickeya dianthicola 67-19 0.28 HGI48_RS12485 envelope stress response membrane protein PspC 0.81 HGI48_RS15700 serine hydroxymethyltransferase — —
Enterobacter sp. TBS_079 0.28 MPMX20_02470 Phage shock protein C 0.79 MPMX20_03420 Serine hydroxymethyltransferase — —
Enterobacter asburiae PDN3 0.28 EX28DRAFT_0978 phage shock protein C (PspC) family protein 0.79 EX28DRAFT_0099 Glycine/serine hydroxymethyltransferase — —
Dickeya dianthicola ME23 0.27 DZA65_RS12935 envelope stress response membrane protein PspC 0.81 DZA65_RS16775 serine hydroxymethyltransferase — —
Klebsiella michiganensis M5al 0.26 BWI76_RS12460 envelope stress response membrane protein PspC 0.79 BWI76_RS21225 serine hydroxymethyltransferase — —
Klebsiella pneumoniae MRSN742743 0.26 GJGHJB_02825 pspC envelope stress response membrane protein PspC 0.79 GJGHJB_01235 glyA Serine hydroxymethyltransferase — —
Klebsiella pneumoniae MKP103 0.26 KDGMDA_19930 envelope stress response membrane protein PspC 0.79 KDGMDA_28355 Serine hydroxymethyltransferase low > 94
Pantoea agglomerans CFBP13505 P0401 0.25 PagCFBP13516_RS09565 pspC envelope stress response membrane protein PspC 0.81 PagCFBP13516_RS05250 glyA serine hydroxymethyltransferase — —

Not shown: 1 genomes with orthologs for CSW01_08425 only; 67 genomes with orthologs for CSW01_04820 only