Conservation of cofitness between CSW01_03415 and CSW01_04585 in Vibrio cholerae E7946 ATCC 55056

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03415 lipoprotein NlpI 1.0 CSW01_04585 tRNA 4-thiouridine(8) synthase ThiI 0.56 9
Dickeya dadantii 3937 0.43 DDA3937_RS03095 lipoprotein NlpI 0.67 DDA3937_RS05545 tRNA 4-thiouridine(8) synthase ThiI low > 74
Enterobacter asburiae PDN3 0.43 EX28DRAFT_3212 Lipoprotein NlpI, contains TPR repeats 0.64 EX28DRAFT_2548 tRNA sulfurtransferase ThiI/thiazole biosynthesis domain low > 76
Dickeya dianthicola 67-19 0.43 HGI48_RS03265 lipoprotein NlpI 0.67 HGI48_RS05605 tRNA 4-thiouridine(8) synthase ThiI low > 71
Pantoea sp. MT58 0.43 IAI47_17000 lipoprotein NlpI 0.64 IAI47_14725 tRNA 4-thiouridine(8) synthase ThiI low > 76
Dickeya dianthicola ME23 0.43 DZA65_RS03260 lipoprotein NlpI 0.67 DZA65_RS05930 tRNA 4-thiouridine(8) synthase ThiI low > 75
Enterobacter sp. TBS_079 0.42 MPMX20_04067 Lipoprotein NlpI 0.64 MPMX20_01014 tRNA sulfurtransferase low > 85
Klebsiella pneumoniae MKP103 0.42 KDGMDA_05870 lipoprotein NlpI 0.65 KDGMDA_14485 tRNA sulfurtransferase low > 95
Escherichia fergusonii Becca 0.42 EFB2_00660 Lipoprotein NlpI 0.66 EFB2_03634 tRNA sulfurtransferase low > 86
Escherichia coli ECRC98 0.42 JDDGAC_21770 nlpI lipoprotein NlpI 0.66 JDDGAC_12060 thiI tRNA sulfurtransferase low > 87
Escherichia coli ECOR38 0.42 HEPCGN_17020 nlpI lipoprotein NlpI 0.65 HEPCGN_07035 thiI tRNA sulfurtransferase low > 88
Escherichia coli Nissle 1917 0.42 ECOLIN_RS18170 lipoprotein NlpI 0.65 ECOLIN_RS02550 tRNA uracil 4-sulfurtransferase ThiI low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_00537 Lipoprotein NlpI 0.65 OHPLBJKB_03253 tRNA sulfurtransferase low > 74
Escherichia coli ECRC102 0.42 NIAGMN_15905 nlpI lipoprotein NlpI 0.66 NIAGMN_06460 thiI tRNA sulfurtransferase low > 80
Serratia liquefaciens MT49 0.42 IAI46_01960 lipoprotein NlpI 0.66 IAI46_04940 tRNA 4-thiouridine(8) synthase ThiI low > 87
Escherichia coli ECRC100 0.42 OKFHMN_18145 nlpI lipoprotein NlpI 0.66 OKFHMN_08405 thiI tRNA sulfurtransferase low > 79
Escherichia coli BL21 0.42 ECD_03030 lipoprotein involved in osmotic sensitivity and filamentation 0.65 ECD_00371 tRNA s(4)U8 sulfurtransferase low > 61
Escherichia coli ECRC99 0.42 KEDOAH_10005 nlpI lipoprotein NlpI 0.66 KEDOAH_19560 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC101 0.42 MCAODC_08665 nlpI lipoprotein NlpI 0.66 MCAODC_27630 thiI tRNA sulfurtransferase low > 87
Escherichia coli BW25113 0.42 b3163 nlpI hypothetical protein (NCBI) 0.65 b0423 thiI thiamine biosynthesis protein ThiI (NCBI) low > 76
Escherichia coli ECOR27 0.42 NOLOHH_09945 nlpI lipoprotein NlpI 0.65 NOLOHH_01355 thiI tRNA sulfurtransferase low > 76
Pantoea agglomerans CFBP13505 P0401 0.42 PagCFBP13505_RS09095 lipoprotein NlpI 0.64 PagCFBP13505_RS10470 tRNA 4-thiouridine(8) synthase ThiI low > 74
Escherichia coli ECRC62 0.42 BNILDI_01590 nlpI lipoprotein NlpI 0.65 BNILDI_22770 thiI tRNA sulfurtransferase low > 75
Rahnella sp. WP5 0.42 EX31_RS08515 lipoprotein NlpI 0.66 EX31_RS22170 tRNA 4-thiouridine(8) synthase ThiI low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF1503 Lipoprotein nlpI precursor 0.66 GFF4327 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis low > 78
Erwinia amylovora T8 0.42 OLJFJH_07270 lipoprotein NlpI 0.65 OLJFJH_18050 tRNA sulfurtransferase low > 58
Klebsiella michiganensis M5al 0.42 BWI76_RS25060 lipoprotein NlpI 0.66 BWI76_RS06395 tRNA 4-thiouridine(8) synthase ThiI low > 92
Erwinia tracheiphila SCR3 0.42 LU632_RS21035 nlpI lipoprotein NlpI 0.65 LU632_RS18845 thiI tRNA 4-thiouridine(8) synthase ThiI — —
Erwinia tracheiphila HP pepo 2.2 0.41 IJEDHG_13965 nlpI lipoprotein NlpI 0.65 IJEDHG_26045 thiI tRNA 4-thiouridine(8) synthase ThiI — —
Pectobacterium carotovorum WPP14 0.41 HER17_RS18185 lipoprotein NlpI 0.66 HER17_RS15920 tRNA 4-thiouridine(8) synthase ThiI low > 75
Shewanella loihica PV-4 0.37 Shew_2821 lipoprotein NlpI (RefSeq) 0.60 Shew_2766 thiamine biosynthesis protein ThiI (RefSeq) low > 60
Shewanella amazonensis SB2B 0.35 Sama_0967 lipoprotein NlpI (RefSeq) 0.59 Sama_2431 thiamine biosynthesis protein ThiI (RefSeq) — —
Shewanella oneidensis MR-1 0.34 SO_1210 lipoprotein NlpI (RefSeq) 0.59 SO1531 thiI thiamine biosynthesis protein ThiI (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.33 Shewana3_1036 lipoprotein NlpI (RefSeq) 0.59 Shewana3_2896 thiamine biosynthesis protein ThiI (RefSeq) low > 73

Not shown: 1 genomes with orthologs for CSW01_03415 only; 24 genomes with orthologs for CSW01_04585 only