Conservation of cofitness between CSW01_18635 and CSW01_03920 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18635 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 1.0 CSW01_03920 peptidase B 0.88 9
Dickeya dianthicola ME23 0.53 DZA65_RS07180 NADP-dependent phosphogluconate dehydrogenase 0.60 DZA65_RS16685 aminopeptidase PepB 0.39 22
Escherichia coli ECRC62 0.52 BNILDI_14695 gndA NADP-dependent phosphogluconate dehydrogenase 0.62 BNILDI_12125 pepB aminopeptidase PepB low > 75
Pectobacterium carotovorum WPP14 0.52 HER17_RS14505 NADP-dependent phosphogluconate dehydrogenase 0.58 HER17_RS06050 aminopeptidase PepB low > 75
Escherichia coli ECRC101 0.52 MCAODC_20470 gndA NADP-dependent phosphogluconate dehydrogenase 0.62 MCAODC_12185 pepB aminopeptidase PepB low > 87
Escherichia coli ECRC99 0.52 KEDOAH_03680 gndA NADP-dependent phosphogluconate dehydrogenase 0.62 KEDOAH_06565 pepB aminopeptidase PepB
Escherichia coli ECRC98 0.52 JDDGAC_28580 gndA NADP-dependent phosphogluconate dehydrogenase 0.62 JDDGAC_25330 pepB aminopeptidase PepB low > 87
Escherichia coli ECRC102 0.52 NIAGMN_22415 gndA NADP-dependent phosphogluconate dehydrogenase 0.62 NIAGMN_19425 pepB aminopeptidase PepB low > 80
Escherichia coli BW25113 0.52 b2029 gnd 6-phosphogluconate dehydrogenase (NCBI) 0.61 b2523 pepB putative peptidase (VIMSS) low > 76
Escherichia coli ECRC100 0.52 OKFHMN_24470 gndA NADP-dependent phosphogluconate dehydrogenase 0.62 OKFHMN_21655 pepB aminopeptidase PepB low > 79
Escherichia coli Nissle 1917 0.52 ECOLIN_RS11990 NADP-dependent phosphogluconate dehydrogenase 0.61 ECOLIN_RS14330 aminopeptidase PepB low > 55
Dickeya dadantii 3937 0.52 DDA3937_RS06805 NADP-dependent phosphogluconate dehydrogenase 0.62 DDA3937_RS15510 aminopeptidase PepB 0.52 41
Escherichia coli ECOR27 0.52 NOLOHH_15785 gndA NADP-dependent phosphogluconate dehydrogenase 0.62 NOLOHH_13325 pepB aminopeptidase PepB low > 75
Escherichia coli BL21 0.52 ECD_01931 6-phosphogluconate dehydrogenase, decarboxylating 0.62 ECD_02415 aminopeptidase B low > 61
Serratia liquefaciens MT49 0.52 IAI46_08160 NADP-dependent phosphogluconate dehydrogenase 0.63 IAI46_19320 aminopeptidase PepB low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01659 6-phosphogluconate dehydrogenase, decarboxylating 0.62 OHPLBJKB_01186 Peptidase B low > 74
Klebsiella pneumoniae MKP103 0.52 KDGMDA_26195 NADP-dependent phosphogluconate dehydrogenase 0.61 KDGMDA_28250 aminopeptidase PepB low > 94
Escherichia coli ECOR38 0.52 HEPCGN_03175 gndA NADP-dependent phosphogluconate dehydrogenase 0.60 HEPCGN_20795 pepB aminopeptidase PepB low > 88
Rahnella sp. WP5 0.52 EX31_RS11475 NADP-dependent phosphogluconate dehydrogenase 0.59 EX31_RS20540 aminopeptidase PepB
Escherichia fergusonii Becca 0.52 EFB2_01826 6-phosphogluconate dehydrogenase, decarboxylating 0.61 EFB2_01367 Peptidase B low > 86
Dickeya dianthicola 67-19 0.52 HGI48_RS06840 NADP-dependent phosphogluconate dehydrogenase 0.61 HGI48_RS15610 aminopeptidase PepB low > 71
Klebsiella michiganensis M5al 0.52 BWI76_RS19025 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 0.61 BWI76_RS21125 aminopeptidase PepB low > 92
Klebsiella pneumoniae MRSN742743 0.52 GJGHJB_01667 gndA NADP-dependent phosphogluconate dehydrogenase 0.61 GJGHJB_01256 pepB aminopeptidase PepB low > 83
Enterobacter sp. TBS_079 0.51 MPMX20_03014 6-phosphogluconate dehydrogenase, decarboxylating 0.60 MPMX20_03404 Peptidase B low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF3903 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) 0.60 GFF2428 Peptidase B (EC 3.4.11.23) low > 78
Enterobacter asburiae PDN3 0.51 EX28DRAFT_0529 6-phosphogluconate dehydrogenase (decarboxylating) 0.60 EX28DRAFT_0117 Leucyl aminopeptidase low > 76
Erwinia amylovora T8 0.51 OLJFJH_12140 NADP-dependent phosphogluconate dehydrogenase 0.63 OLJFJH_10370 aminopeptidase PepB
Erwinia tracheiphila HP pepo 2.2 0.50 IJEDHG_19020 gndA NADP-dependent phosphogluconate dehydrogenase 0.61 IJEDHG_02865 pepB aminopeptidase PepB
Pantoea sp. MT58 0.50 IAI47_07035 NADP-dependent phosphogluconate dehydrogenase 0.60 IAI47_05010 aminopeptidase PepB
Pantoea agglomerans CFBP13505 P0401 0.50 PagCFBP13516_RS07425 gndA NADP-dependent phosphogluconate dehydrogenase 0.60 PagCFBP13516_RS05300 pepB aminopeptidase PepB
Erwinia tracheiphila SCR3 0.50 LU632_RS08890 gndA NADP-dependent phosphogluconate dehydrogenase 0.61 LU632_RS17865 pepB aminopeptidase PepB low > 73
Shewanella amazonensis SB2B 0.43 Sama_1365 6-phosphogluconate dehydrogenase (RefSeq) 0.44 Sama_0782 aminopeptidase B (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.42 MIT1002_02397 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating 0.45 MIT1002_03688 Peptidase B low > 70
Shewanella loihica PV-4 0.42 Shew_2561 6-phosphogluconate dehydrogenase (RefSeq) 0.42 Shew_3127 aminopeptidase B (RefSeq) low > 60
Shewanella sp. ANA-3 0.42 Shewana3_1677 6-phosphogluconate dehydrogenase (RefSeq) 0.42 Shewana3_3402 aminopeptidase B (RefSeq) 0.52 36
Shewanella oneidensis MR-1 0.40 SO1902 gnd 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) 0.43 SO0876 pepB peptidase B (NCBI ptt file) low > 76

Not shown: 26 genomes with orthologs for CSW01_18635 only; 1 genomes with orthologs for CSW01_03920 only