| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_16820 | | PTS fructose transporter subunit IIBC | 1.0 | CSW01_03770 | | phosphate ABC transporter substrate-binding protein | 0.49 | 7 |
| Pseudomonas fluorescens GW456-L13 | 0.61 | PfGW456L13_5073 | | PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) | 0.57 | PfGW456L13_753 | | Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.60 | AO353_05475 | | PTS fructose transporter subunit IIBC | 0.58 | AO353_09905 | | phosphate-binding protein | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.60 | Pf6N2E2_3337 | | PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) | 0.58 | Pf6N2E2_4075 | | Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) | low | > 103 |
| Pseudomonas sp. RS175 | 0.60 | PFR28_00107 | | hypothetical protein | 0.57 | PFR28_04489 | | Phosphate-binding protein PstS | low | > 88 |
| Pseudomonas sp. DMC3 | 0.60 | GFF5005 | | PTS system fructose-specific EIIB'BC component | 0.58 | GFF479 | | Phosphate-binding protein PstS | 0.56 | 42 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_0823 | | PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family | 0.59 | Psyr_5041 | | phosphate ABC transporter substrate-binding protein, PhoT family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_0823 | | PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family | 0.59 | Psyr_5041 | | phosphate ABC transporter substrate-binding protein, PhoT family | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.59 | Pf1N1B4_1144 | | PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) | 0.57 | Pf1N1B4_2034 | | Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) | — | — |
| Pantoea sp. MT58 | 0.59 | IAI47_06660 | | PTS fructose transporter subunit IIBC | 0.37 | IAI47_14845 | | PstS family phosphate ABC transporter substrate-binding protein | low | > 76 |
| Pseudomonas sp. SVBP6 | 0.59 | COO64_RS11285 | | PTS fructose-like transporter subunit IIB | 0.57 | COO64_RS01715 | | phosphate ABC transporter substrate-binding protein PstS | low | > 93 |
| Pantoea agglomerans CFBP13505 P0401 | 0.58 | PagCFBP13505_RS00755 | | PTS fructose transporter subunit IIBC | 0.37 | PagCFBP13505_RS10305 | | PstS family phosphate ABC transporter substrate-binding protein | low | > 74 |
| Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_07325 | | fructose phosphotransferase system, IIB/IIC components (EC 2.7.1.202) (from data) | 0.57 | AO356_11045 | | phosphate-binding protein | low | > 104 |
| Pseudomonas lactucae CFBP13502 | 0.58 | GEMAOFIL_00999 | | 'PTS system fructose-specific EIIB'BC component' transl_table=11 | 0.57 | GEMAOFIL_00083 | | Phosphate-binding protein PstS | low | > 96 |
| Serratia liquefaciens MT49 | 0.58 | IAI46_17230 | | PTS fructose transporter subunit IIBC | 0.48 | IAI46_04785 | | phosphate ABC transporter substrate-binding protein PstS family protein | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.58 | Psest_3353 | | PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component | 0.57 | Psest_0219 | | phosphate binding protein | — | — |
| Pseudomonas orientalis W4I3 | 0.57 | QF045_RS06950 | | PTS fructose-like transporter subunit IIB | 0.58 | QF045_RS02440 | | phosphate ABC transporter substrate-binding protein PstS | low | > 93 |
| Pseudomonas fluorescens SBW25-INTG | 0.57 | PFLU_RS04020 | | PTS fructose-like transporter subunit IIB | 0.58 | PFLU_RS29770 | | phosphate ABC transporter substrate-binding protein PstS | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.57 | PFLU_RS04020 | | PTS fructose-like transporter subunit IIB | 0.58 | PFLU_RS29770 | | phosphate ABC transporter substrate-binding protein PstS | low | > 109 |
| Pseudomonas sp. BP01 | 0.57 | JOY50_RS19305 | | PTS fructose-like transporter subunit IIB | 0.57 | JOY50_RS08855 | | phosphate ABC transporter substrate-binding protein PstS | low | > 84 |
| Pectobacterium carotovorum WPP14 | 0.57 | HER17_RS12855 | | PTS fructose transporter subunit IIBC | 0.47 | HER17_RS16030 | | phosphate ABC transporter substrate-binding protein | low | > 75 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_03975 | | FruA | 0.58 | PS417_28085 | | phosphate-binding protein | 0.21 | 33 |
| Dickeya dianthicola ME23 | 0.56 | DZA65_RS09575 | | PTS fructose transporter subunit IIBC | 0.45 | DZA65_RS05820 | | phosphate ABC transporter substrate-binding protein | low | > 75 |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS09270 | | PTS fructose transporter subunit IIBC | 0.45 | HGI48_RS05495 | | phosphate ABC transporter substrate-binding protein | low | > 71 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS09240 | | PTS fructose transporter subunit IIBC | 0.45 | DDA3937_RS05435 | | phosphate ABC transporter substrate-binding protein | low | > 74 |
| Erwinia amylovora T8 | 0.55 | OLJFJH_11780 | | PTS fructose transporter subunit IIBC | 0.42 | OLJFJH_18175 | | phosphate ABC transporter substrate-binding protein | low | > 58 |
| Pseudomonas putida KT2440 | 0.55 | PP_0795 | | fructose PTS permease - IIBC component | 0.57 | PP_5329 | | putative phosphate ABC transporter, periplasmic phosphate-binding protein | low | > 96 |
| Pseudomonas aeruginosa PUPa3 | 0.51 | DQ20_RS41935 | | PTS fructose-like transporter subunit IIB | 0.59 | DQ20_RS49390 | pstS;inference=COORDINATES | phosphate ABC transporter substrate-binding protein PstS | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.51 | IKLFDK_18170 | | PTS fructose-like transporter subunit IIB | 0.59 | IKLFDK_26610 | | phosphate ABC transporter substrate-binding protein PstS | low | > 98 |
| Pseudomonas aeruginosa MRSN321 | 0.51 | DY961_RS15210 | | PTS fructose-like transporter subunit IIB | 0.59 | DY961_RS12740 | pstS;inference=COORDINATES | phosphate ABC transporter substrate-binding protein PstS | low | > 100 |
Not shown: 33 genomes with orthologs for CSW01_16820 only; 11 genomes with orthologs for CSW01_03770 only