Conservation of cofitness between CSW01_00690 and CSW01_03640 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00690 homoserine/homoserine lactone efflux protein 1.0 CSW01_03640 bifunctional chorismate mutase/prephenate dehydrogenase 0.62 7
Dickeya dianthicola ME23 0.55 DZA65_RS21035 homoserine/homoserine lactone efflux protein 0.66 DZA65_RS17350 bifunctional chorismate mutase/prephenate dehydrogenase — —
Erwinia tracheiphila SCR3 0.54 LU632_RS24085 rhtB homoserine/homoserine lactone efflux protein 0.64 LU632_RS15445 tyrA bifunctional chorismate mutase/prephenate dehydrogenase low > 74
Klebsiella michiganensis M5al 0.53 BWI76_RS01255 homoserine/homoserine lactone efflux protein 0.66 BWI76_RS21475 bifunctional chorismate mutase/prephenate dehydrogenase low > 92
Escherichia coli ECRC99 0.53 KEDOAH_13800 rhtB homoserine/homoserine lactone efflux protein 0.65 KEDOAH_07000 tyrA bifunctional chorismate mutase/prephenate dehydrogenase — —
Escherichia coli ECRC100 0.53 OKFHMN_14350 rhtB homoserine/homoserine lactone efflux protein 0.65 OKFHMN_21220 tyrA bifunctional chorismate mutase/prephenate dehydrogenase low > 80
Escherichia coli BW25113 0.53 b3824 rhtB neutral amino-acid efflux system (NCBI) 0.65 b2600 tyrA fused chorismate mutase T/prephenate dehydrogenase (NCBI) low > 76
Escherichia coli BL21 0.53 ECD_03703 homoserine, homoserine lactone and S-methyl-methionine efflux pump 0.65 ECD_02489 fused chorismate mutase T/prephenate dehydrogenase low > 61
Escherichia fergusonii Becca 0.53 EFB2_04813 Homoserine/homoserine lactone efflux protein 0.66 EFB2_01292 T-protein low > 86
Escherichia coli ECOR27 0.53 NOLOHH_06480 rhtB homoserine/homoserine lactone efflux protein 0.65 NOLOHH_12895 tyrA bifunctional chorismate mutase/prephenate dehydrogenase low > 75
Escherichia coli ECRC101 0.53 MCAODC_04855 rhtB homoserine/homoserine lactone efflux protein 0.65 MCAODC_11750 tyrA bifunctional chorismate mutase/prephenate dehydrogenase low > 87
Escherichia coli Nissle 1917 0.53 ECOLIN_RS21945 homoserine/homoserine lactone efflux protein 0.66 ECOLIN_RS14700 bifunctional chorismate mutase/prephenate dehydrogenase low > 55
Escherichia coli ECRC98 0.53 JDDGAC_17975 rhtB homoserine/homoserine lactone efflux protein 0.65 JDDGAC_24885 tyrA bifunctional chorismate mutase/prephenate dehydrogenase low > 86
Escherichia coli ECRC62 0.53 BNILDI_05050 rhtB homoserine/homoserine lactone efflux protein 0.65 BNILDI_11700 tyrA bifunctional chorismate mutase/prephenate dehydrogenase low > 75
Escherichia coli ECRC102 0.53 NIAGMN_12105 rhtB homoserine/homoserine lactone efflux protein 0.65 NIAGMN_18990 tyrA bifunctional chorismate mutase/prephenate dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_04227 Homoserine/homoserine lactone efflux protein 0.65 OHPLBJKB_01108 T-protein low > 73
Escherichia coli ECOR38 0.52 HEPCGN_13050 rhtB homoserine/homoserine lactone efflux protein 0.65 HEPCGN_20340 tyrA bifunctional chorismate mutase/prephenate dehydrogenase low > 87
Enterobacter asburiae PDN3 0.52 EX28DRAFT_4489 The Resistance to Homoserine/Threonine (RhtB) Family protein 0.65 EX28DRAFT_2701 chorismate mutase (EC 5.4.99.5) low > 76
Enterobacter sp. TBS_079 0.52 MPMX20_04456 Homoserine/homoserine lactone efflux protein 0.65 MPMX20_03468 T-protein low > 85
Pectobacterium carotovorum WPP14 0.50 HER17_RS01405 homoserine/homoserine lactone efflux protein 0.67 HER17_RS05380 bifunctional chorismate mutase/prephenate dehydrogenase low > 75
Erwinia amylovora T8 0.49 OLJFJH_06450 homoserine/homoserine lactone efflux protein 0.66 OLJFJH_09705 bifunctional chorismate mutase/prephenate dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF250 Homoserine/homoserine lactone efflux protein 0.65 GFF4177 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) low > 78
Dickeya dianthicola 67-19 0.49 HGI48_RS19990 homoserine/homoserine lactone efflux protein 0.65 HGI48_RS16255 bifunctional chorismate mutase/prephenate dehydrogenase — —
Dickeya dadantii 3937 0.48 DDA3937_RS19835 homoserine/homoserine lactone efflux protein 0.65 DDA3937_RS16135 bifunctional chorismate mutase/prephenate dehydrogenase — —
Rahnella sp. WP5 0.47 EX31_RS15220 homoserine/homoserine lactone efflux protein 0.68 EX31_RS07590 bifunctional chorismate mutase/prephenate dehydrogenase low > 89
Pantoea sp. MT58 0.46 IAI47_18345 homoserine/homoserine lactone efflux protein 0.66 IAI47_04405 bifunctional chorismate mutase/prephenate dehydrogenase — —
Serratia liquefaciens MT49 0.45 IAI46_00780 homoserine/homoserine lactone efflux protein 0.68 IAI46_03960 bifunctional chorismate mutase/prephenate dehydrogenase low > 86
Shewanella sp. ANA-3 0.26 Shewana3_0118 lysine exporter protein LysE/YggA (RefSeq) 0.57 Shewana3_3012 tyrA bifunctional chorismate mutase/prephenate dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.25 SO0122 transporter, LysE family (NCBI ptt file) 0.57 SO1362 tyrA chorismate mutase/prephenate dehydrogenase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.24 Shew_3751 lysine exporter protein LysE/YggA (RefSeq) 0.57 Shew_1068 tyrA bifunctional chorismate mutase/prephenate dehydrogenase (RefSeq) — —
Shewanella amazonensis SB2B 0.18 Sama_3631 amino acid transporter LysE (RefSeq) 0.61 Sama_0894 tyrA bifunctional chorismate mutase/prephenate dehydrogenase (RefSeq) low > 62

Not shown: 45 genomes with orthologs for CSW01_00690 only; 1 genomes with orthologs for CSW01_03640 only