Conservation of cofitness between CSW01_10815 and CSW01_03515 in Vibrio cholerae E7946 ATCC 55056

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10815 Cys-tRNA(Pro) deacylase 1.0 CSW01_03515 DNA mismatch repair protein MutH 0.51 4
Pectobacterium carotovorum WPP14 0.57 HER17_RS15635 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.66 HER17_RS16590 DNA mismatch repair endonuclease MutH low > 75
Escherichia coli Nissle 1917 0.56 ECOLIN_RS02850 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.64 ECOLIN_RS15895 DNA mismatch repair endonuclease MutH — —
Escherichia fergusonii Becca 0.56 EFB2_03577 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.65 EFB2_01052 DNA mismatch repair protein MutH low > 86
Escherichia coli BW25113 0.55 b0481 ybaK hypothetical protein (NCBI) 0.64 b2831 mutH DNA mismatch repair protein (NCBI) low > 76
Escherichia coli ECOR27 0.55 NOLOHH_01035 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.65 NOLOHH_11875 mutH DNA mismatch repair endonuclease MutH low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_03193 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.64 OHPLBJKB_00898 DNA mismatch repair protein MutH low > 73
Escherichia coli ECRC62 0.55 BNILDI_22455 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.64 BNILDI_10355 mutH DNA mismatch repair endonuclease MutH 0.62 64
Escherichia coli ECOR38 0.55 HEPCGN_06725 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.65 HEPCGN_19245 mutH DNA mismatch repair endonuclease MutH low > 87
Escherichia coli BL21 0.55 ECD_00432 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase 0.64 ECD_02679 methyl-directed mismatch repair protein low > 61
Rahnella sp. WP5 0.55 EX31_RS22565 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.66 EX31_RS13210 DNA mismatch repair endonuclease MutH low > 89
Serratia liquefaciens MT49 0.55 IAI46_05300 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.67 IAI46_20460 DNA mismatch repair endonuclease MutH low > 86
Escherichia coli ECRC100 0.55 OKFHMN_08105 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.65 OKFHMN_19990 mutH DNA mismatch repair endonuclease MutH low > 80
Escherichia coli ECRC101 0.55 MCAODC_27325 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.65 MCAODC_10515 mutH DNA mismatch repair endonuclease MutH low > 87
Escherichia coli ECRC98 0.55 JDDGAC_11750 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.65 JDDGAC_23655 mutH DNA mismatch repair endonuclease MutH low > 86
Escherichia coli ECRC102 0.55 NIAGMN_06155 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.65 NIAGMN_17760 mutH DNA mismatch repair endonuclease MutH — —
Escherichia coli ECRC99 0.55 KEDOAH_19865 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.65 KEDOAH_08140 mutH DNA mismatch repair endonuclease MutH — —
Erwinia amylovora T8 0.54 OLJFJH_17720 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.65 OLJFJH_09040 DNA mismatch repair endonuclease MutH low > 58
Pantoea sp. MT58 0.54 IAI47_14410 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.64 IAI47_03910 DNA mismatch repair endonuclease MutH low > 76
Enterobacter sp. TBS_079 0.54 MPMX20_01082 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.66 MPMX20_03694 DNA mismatch repair protein MutH low > 85
Klebsiella michiganensis M5al 0.54 BWI76_RS06870 aminoacyl-tRNA deacylase 0.64 BWI76_RS23290 DNA mismatch repair protein MutH low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF4401 Cys-tRNA(Pro) deacylase YbaK 0.66 GFF1314 DNA mismatch repair endonuclease MutH low > 78
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2477 Cys-tRNA(Pro) deacylase 0.67 EX28DRAFT_2906 DNA mismatch repair protein MutH low > 76
Erwinia tracheiphila SCR3 0.51 LU632_RS15310 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.68 LU632_RS06095 mutH DNA mismatch repair endonuclease MutH low > 74
Dickeya dadantii 3937 0.50 DDA3937_RS05835 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.63 DDA3937_RS04940 DNA mismatch repair endonuclease MutH low > 74
Shewanella oneidensis MR-1 0.50 SO1124 conserved hypothetical protein TIGR00011 (NCBI ptt file) 0.62 SO1330 mutH DNA mismatch repair protein MutH (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.50 Shewana3_0957 ybaK/ebsC protein (RefSeq) 0.61 Shewana3_3044 DNA mismatch repair protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.49 Sama_0531 YbaK/EbsC protein (RefSeq) 0.59 Sama_0862 DNA mismatch repair protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.49 MIT1002_01641 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.53 MIT1002_00646 Methyl-directed mismatch repair protein low > 70
Dickeya dianthicola 67-19 0.43 HGI48_RS05880 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.63 HGI48_RS04950 DNA mismatch repair endonuclease MutH — —
Dickeya dianthicola ME23 0.43 DZA65_RS06215 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.63 DZA65_RS05285 DNA mismatch repair endonuclease MutH low > 75
Shewanella loihica PV-4 0.42 Shew_0016 ybaK/ebsC protein (RefSeq) 0.60 Shew_1037 DNA mismatch repair protein (RefSeq) — —

Not shown: 57 genomes with orthologs for CSW01_10815 only; 1 genomes with orthologs for CSW01_03515 only