Conservation of cofitness between CSW01_05125 and CSW01_03480 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05125 ribonuclease T 1.0 CSW01_03480 tRNA (adenosine(37)-N6)-methyltransferase TrmM 0.48 10
Shewanella loihica PV-4 0.62 Shew_1520 ribonuclease T (RefSeq) 0.35 Shew_0768 methyltransferase small (RefSeq) — —
Shewanella amazonensis SB2B 0.61 Sama_2093 ribonuclease T (RefSeq) 0.31 Sama_2741 hypothetical protein (RefSeq) — —
Shewanella oneidensis MR-1 0.61 SO2755 rnt ribonuclease T (NCBI ptt file) 0.29 SO0948 conserved hypothetical protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.61 Shewana3_2540 ribonuclease T (RefSeq) 0.34 Shewana3_3333 methyltransferase small (RefSeq) — —
Rahnella sp. WP5 0.60 EX31_RS13815 ribonuclease T 0.32 EX31_RS21790 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 89
Enterobacter sp. TBS_079 0.60 MPMX20_01984 Ribonuclease T 0.31 MPMX20_03446 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 85
Pectobacterium carotovorum WPP14 0.60 HER17_RS09255 ribonuclease T 0.33 HER17_RS05770 tRNA1(Val) (adenine(37)-N6)-methyltransferase — —
Enterobacter asburiae PDN3 0.60 EX28DRAFT_1650 ribonuclease T 0.31 EX28DRAFT_0070 Predicted O-methyltransferase low > 76
Escherichia coli BW25113 0.60 b1652 rnt ribonuclease T (NCBI) 0.30 b2575 yfiC putative enzyme (VIMSS) — —
Escherichia coli ECRC99 0.59 KEDOAH_00685 rnt ribonuclease T 0.30 KEDOAH_06855 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN — —
Escherichia coli ECOR27 0.59 NOLOHH_17945 rnt ribonuclease T 0.30 NOLOHH_13040 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN — —
Escherichia coli ECRC101 0.59 MCAODC_17985 rnt ribonuclease T 0.30 MCAODC_11895 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN — —
Escherichia coli ECRC100 0.59 OKFHMN_27425 rnt ribonuclease T 0.30 OKFHMN_21365 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN — —
Escherichia coli ECRC102 0.59 NIAGMN_00640 rnt ribonuclease T 0.30 NIAGMN_19135 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_02073 Ribonuclease T 0.30 OHPLBJKB_01132 tRNA1(Val) (adenine(37)-N6)-methyltransferase — —
Escherichia coli ECOR38 0.59 HEPCGN_05810 rnt ribonuclease T 0.30 HEPCGN_20510 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN — —
Escherichia coli BL21 0.59 ECD_01622 RNase T; exoribonuclease T; structured DNA 3 0.30 ECD_02469 tRNA1(Val) (adenine(37)-N6)-methyltransferase — —
Escherichia coli ECRC98 0.59 JDDGAC_02015 rnt ribonuclease T 0.30 JDDGAC_25030 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN — —
Escherichia coli Nissle 1917 0.59 ECOLIN_RS09210 ribonuclease T 0.30 ECOLIN_RS14575 tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN — —
Escherichia coli ECRC62 0.59 BNILDI_16735 rnt ribonuclease T 0.30 BNILDI_11840 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN — —
Escherichia fergusonii Becca 0.59 EFB2_02340 Ribonuclease T 0.30 EFB2_01321 tRNA1(Val) (adenine(37)-N6)-methyltransferase — —
Dickeya dianthicola 67-19 0.59 HGI48_RS12665 ribonuclease T 0.33 HGI48_RS15860 tRNA1(Val) (adenine(37)-N6)-methyltransferase — —
Dickeya dianthicola ME23 0.59 DZA65_RS13120 ribonuclease T 0.33 DZA65_RS16940 methyltransferase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF3622 Ribonuclease T (EC 3.1.13.-) 0.28 GFF2105 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) — —
Serratia liquefaciens MT49 0.59 IAI46_11265 ribonuclease T 0.30 IAI46_19595 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 87
Dickeya dadantii 3937 0.59 DDA3937_RS12605 ribonuclease T 0.31 DDA3937_RS15775 tRNA1(Val) (adenine(37)-N6)-methyltransferase — —
Klebsiella michiganensis M5al 0.58 BWI76_RS16485 ribonuclease T 0.30 BWI76_RS21365 tRNA (adenosine(37)-N6)-methyltransferase TrmM low > 92
Klebsiella pneumoniae MRSN742743 0.58 KFA93_RS13895 rnt;go_function=RNA ribonuclease T 0.31 KFA93_RS04680 trmN;go_function=nucleic tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN — —
Klebsiella pneumoniae MKP103 0.58 KDGMDA_23430 ribonuclease T 0.31 KDGMDA_28490 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 94
Pantoea sp. MT58 0.57 IAI47_10775 ribonuclease T 0.33 IAI47_04840 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 76
Pantoea agglomerans CFBP13505 P0401 0.56 PagCFBP13516_RS10940 rnt ribonuclease T 0.35 PagCFBP13516_RS05130 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN low > 80
Erwinia amylovora T8 0.54 OLJFJH_14495 ribonuclease T 0.32 OLJFJH_10205 SAM-dependent methyltransferase low > 58
Erwinia tracheiphila SCR3 0.52 LU632_RS11220 rnt ribonuclease T 0.32 LU632_RS15435 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 73
Erwinia tracheiphila HP pepo 2.2 0.52 IJEDHG_25130 rnt ribonuclease T 0.31 IJEDHG_01255 SAM-dependent methyltransferase low > 61

Not shown: 32 genomes with orthologs for CSW01_05125 only; 10 genomes with orthologs for CSW01_03480 only