Conservation of cofitness between CSW01_13865 and CSW01_03475 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13865 nitrogen regulation protein NR(I) 1.0 CSW01_03475 ATP-dependent RNA helicase SrmB 0.43 12
Enterobacter asburiae PDN3 0.73 EX28DRAFT_4350 nitrogen regulation protein NR(I) 0.57 EX28DRAFT_0069 Superfamily II DNA and RNA helicases low > 76
Enterobacter sp. TBS_079 0.73 MPMX20_04597 DNA-binding transcriptional regulator NtrC 0.57 MPMX20_03447 ATP-dependent RNA helicase SrmB low > 85
Escherichia fergusonii Becca 0.72 EFB2_04748 DNA-binding transcriptional regulator NtrC 0.56 EFB2_01320 ATP-dependent RNA helicase SrmB low > 86
Serratia liquefaciens MT49 0.72 IAI46_24960 nitrogen regulation protein NR(I) 0.58 IAI46_19600 ATP-dependent RNA helicase SrmB low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF2220 Nitrogen regulation protein NR(I) 0.57 GFF2104 ATP-dependent RNA helicase SrmB low > 78
Escherichia coli ECRC101 0.72 MCAODC_04610 glnG nitrogen regulation protein NR(I) 0.56 MCAODC_11890 srmB ATP-dependent RNA helicase SrmB low > 87
Escherichia coli ECOR27 0.72 NOLOHH_06240 glnG nitrogen regulation protein NR(I) 0.56 NOLOHH_13035 srmB ATP-dependent RNA helicase SrmB 0.47 62
Escherichia coli ECRC99 0.72 KEDOAH_14040 glnG nitrogen regulation protein NR(I) 0.56 KEDOAH_06860 srmB ATP-dependent RNA helicase SrmB — —
Escherichia coli ECRC100 0.72 OKFHMN_14110 glnG nitrogen regulation protein NR(I) 0.56 OKFHMN_21360 srmB ATP-dependent RNA helicase SrmB low > 79
Escherichia coli ECRC98 0.72 JDDGAC_17735 glnG nitrogen regulation protein NR(I) 0.56 JDDGAC_25025 srmB ATP-dependent RNA helicase SrmB — —
Escherichia coli Nissle 1917 0.72 ECOLIN_RS22295 nitrogen regulation protein NR(I) 0.56 ECOLIN_RS14580 ATP-dependent RNA helicase SrmB 0.64 16
Escherichia coli ECRC102 0.72 NIAGMN_11865 glnG nitrogen regulation protein NR(I) 0.56 NIAGMN_19130 srmB ATP-dependent RNA helicase SrmB low > 80
Escherichia coli BW25113 0.72 b3868 glnG fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) 0.56 b2576 srmB ATP-dependent RNA helicase (NCBI) low > 76
Klebsiella pneumoniae MKP103 0.72 KDGMDA_09000 nitrogen regulation protein NR(I) 0.56 KDGMDA_28495 ATP-dependent RNA helicase SrmB low > 95
Escherichia coli ECRC62 0.72 BNILDI_05290 glnG nitrogen regulation protein NR(I) 0.56 BNILDI_11835 srmB ATP-dependent RNA helicase SrmB low > 75
Klebsiella michiganensis M5al 0.72 BWI76_RS00385 nitrogen assimilation regulatory protein 0.58 BWI76_RS21370 ATP-dependent RNA helicase SrmB low > 92
Escherichia coli ECOR38 0.72 HEPCGN_12740 glnG nitrogen regulation protein NR(I) 0.56 HEPCGN_20505 srmB ATP-dependent RNA helicase SrmB low > 88
Escherichia coli BL21 0.72 ECD_03753 fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein 0.56 ECD_02470 ATP-dependent RNA helicase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_04184 DNA-binding transcriptional regulator NtrC 0.56 OHPLBJKB_01131 ATP-dependent RNA helicase SrmB low > 74
Pantoea sp. MT58 0.72 IAI47_00450 nitrogen regulation protein NR(I) 0.60 IAI47_04835 ATP-dependent RNA helicase SrmB low > 76
Rahnella sp. WP5 0.72 EX31_RS15880 nitrogen regulation protein NR(I) 0.58 EX31_RS21785 ATP-dependent RNA helicase SrmB low > 89
Erwinia amylovora T8 0.72 OLJFJH_05495 nitrogen regulation protein NR(I) 0.59 OLJFJH_10200 ATP-dependent RNA helicase SrmB low > 58
Pantoea agglomerans CFBP13505 P0401 0.71 PagCFBP13505_RS18895 nitrogen regulation protein NR(I) 0.59 PagCFBP13505_RS14725 ATP-dependent RNA helicase SrmB low > 74
Pectobacterium carotovorum WPP14 0.71 HER17_RS21440 nitrogen regulation protein NR(I) 0.57 HER17_RS05765 ATP-dependent RNA helicase SrmB low > 75
Dickeya dadantii 3937 0.71 DDA3937_RS00125 nitrogen regulation protein NR(I) 0.56 DDA3937_RS15780 ATP-dependent RNA helicase SrmB low > 74
Dickeya dianthicola ME23 0.71 DZA65_RS22210 nitrogen regulation protein NR(I) 0.56 DZA65_RS16945 ATP-dependent RNA helicase SrmB low > 75
Dickeya dianthicola 67-19 0.71 HGI48_RS21235 nitrogen regulation protein NR(I) 0.56 HGI48_RS15865 ATP-dependent RNA helicase SrmB low > 71
Erwinia tracheiphila SCR3 0.71 LU632_RS22135 glnG nitrogen regulation protein NR(I) 0.58 LU632_RS15440 srmB ATP-dependent RNA helicase SrmB low > 73
Erwinia tracheiphila HP pepo 2.2 0.70 IJEDHG_08285 glnG nitrogen regulation protein NR(I) 0.58 IJEDHG_01260 srmB ATP-dependent RNA helicase SrmB low > 61
Shewanella oneidensis MR-1 0.69 SO4472 ntrC nitrogen regulation protein NR(I) (NCBI ptt file) 0.52 SO0947 srmB ATP-dependent RNA helicase SrmB (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.69 Shewana3_0258 nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) 0.52 Shewana3_3336 ATP-dependent RNA helicase SrmB (RefSeq) low > 73
Shewanella loihica PV-4 0.69 Shew_3561 nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) 0.52 Shew_0767 ATP-dependent RNA helicase SrmB (RefSeq) 0.71 24
Alteromonas macleodii MIT1002 0.69 MIT1002_03186 Nitrogen regulation protein NR(I) 0.56 MIT1002_00941 ATP-dependent RNA helicase SrmB — —
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_09730 nitrogen regulation protein NR(I) 0.34 AO356_04210 RNA helicase — —
Azospirillum sp. SherDot2 0.40 MPMX19_01112 DNA-binding transcriptional regulator NtrC 0.37 MPMX19_06125 RNA helicase CrhR — —

Not shown: 79 genomes with orthologs for CSW01_13865 only; 0 genomes with orthologs for CSW01_03475 only