Conservation of cofitness between CSW01_12980 and CSW01_02065 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12980 ATP-dependent RNA helicase DbpA 1.0 CSW01_02065 lysine-sensitive aspartokinase 3 0.48 4
Shewanella amazonensis SB2B 0.68 Sama_0752 ATP-dependent RNA helicase DbpA (RefSeq) 0.56 Sama_0603 aspartate kinase III (RefSeq) low > 62
Shewanella sp. ANA-3 0.67 Shewana3_3384 ATP-dependent RNA helicase DbpA (RefSeq) 0.54 Shewana3_0652 aspartate kinase III (RefSeq) low > 73
Shewanella oneidensis MR-1 0.66 SO0897 dbpA ATP-dependent RNA helicase DbpA (NCBI ptt file) 0.54 SO3986 lysC aspartokinase III, lysine-sensitive (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.62 Shew_0598 ATP-dependent RNA helicase DbpA (RefSeq) 0.54 Shew_0779 aspartate kinase III (RefSeq) low > 60
Serratia liquefaciens MT49 0.55 IAI46_14765 ATP-dependent RNA helicase DbpA 0.52 IAI46_23100 lysine-sensitive aspartokinase 3 low > 87
Pectobacterium carotovorum WPP14 0.53 HER17_RS06775 ATP-dependent RNA helicase DbpA 0.54 HER17_RS02335 lysine-sensitive aspartokinase 3 low > 75
Dickeya dadantii 3937 0.53 DDA3937_RS11045 ATP-dependent RNA helicase DbpA 0.56 DDA3937_RS19020 lysine-sensitive aspartokinase 3 low > 74
Escherichia coli Nissle 1917 0.52 ECOLIN_RS08060 ATP-dependent RNA helicase DbpA 0.50 ECOLIN_RS23235 lysine-sensitive aspartokinase 3 low > 55
Erwinia amylovora T8 0.52 OLJFJH_13775 ATP-dependent RNA helicase DbpA 0.51 OLJFJH_03640 lysine-sensitive aspartokinase 3 low > 58
Escherichia fergusonii Becca 0.52 EFB2_02584 ATP-dependent RNA helicase DbpA 0.50 EFB2_04578 Lysine-sensitive aspartokinase 3 low > 86
Escherichia coli ECOR38 0.52 HEPCGN_26000 dbpA ATP-dependent RNA helicase DbpA 0.51 HEPCGN_11690 lysC lysine-sensitive aspartokinase 3 low > 88
Escherichia coli ECOR27 0.52 NOLOHH_19875 dbpA ATP-dependent RNA helicase DbpA 0.50 NOLOHH_05340 lysC lysine-sensitive aspartokinase 3 low > 76
Dickeya dianthicola 67-19 0.52 HGI48_RS11065 ATP-dependent RNA helicase DbpA 0.56 HGI48_RS19105 lysine-sensitive aspartokinase 3 low > 71
Dickeya dianthicola ME23 0.52 DZA65_RS11470 ATP-dependent RNA helicase DbpA 0.55 DZA65_RS20225 lysine-sensitive aspartokinase 3 low > 75
Escherichia coli ECRC62 0.52 BNILDI_18025 dbpA ATP-dependent RNA helicase DbpA 0.50 BNILDI_06180 lysC lysine-sensitive aspartokinase 3 low > 75
Klebsiella pneumoniae MKP103 0.52 KDGMDA_20600 ATP-dependent RNA helicase DbpA 0.53 KDGMDA_10230 lysine-sensitive aspartokinase 3 low > 95
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_02338 ATP-dependent RNA helicase DbpA 0.50 OHPLBJKB_04022 Lysine-sensitive aspartokinase 3 low > 74
Escherichia coli BW25113 0.52 b1343 dbpA ATP-dependent RNA helicase, specific for 23S rRNA (NCBI) 0.50 b4024 lysC aspartate kinase III (NCBI) low > 76
Escherichia coli BL21 0.52 ECD_01320 ATP-dependent RNA helicase, specific for 23S rRNA 0.50 ECD_03896 lysine-sensitive aspartokinase 3 low > 61
Escherichia coli ECRC100 0.52 OKFHMN_02160 dbpA ATP-dependent RNA helicase DbpA 0.50 OKFHMN_13180 lysC lysine-sensitive aspartokinase 3 low > 79
Escherichia coli ECRC102 0.52 NIAGMN_26330 dbpA ATP-dependent RNA helicase DbpA 0.50 NIAGMN_10930 lysC lysine-sensitive aspartokinase 3 low > 80
Escherichia coli ECRC99 0.52 KEDOAH_26595 dbpA ATP-dependent RNA helicase DbpA 0.50 KEDOAH_14980 lysC lysine-sensitive aspartokinase 3 — —
Escherichia coli ECRC101 0.52 MCAODC_16095 dbpA ATP-dependent RNA helicase DbpA 0.50 MCAODC_03680 lysC lysine-sensitive aspartokinase 3 low > 87
Rahnella sp. WP5 0.52 EX31_RS24740 ATP-dependent RNA helicase DbpA 0.53 EX31_RS11810 lysine-sensitive aspartokinase 3 low > 89
Escherichia coli ECRC98 0.52 JDDGAC_04720 dbpA ATP-dependent RNA helicase DbpA 0.50 JDDGAC_16805 lysC lysine-sensitive aspartokinase 3 low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF2649 ATP-dependent 23S rRNA helicase DbpA 0.49 GFF1395 Aspartokinase (EC 2.7.2.4) low > 78
Enterobacter asburiae PDN3 0.51 EX28DRAFT_1006 Superfamily II DNA and RNA helicases 0.54 EX28DRAFT_4319 aspartate kinase (EC 2.7.2.4) low > 76
Enterobacter sp. TBS_079 0.51 MPMX20_02441 ATP-dependent RNA helicase DbpA 0.54 MPMX20_00240 Lysine-sensitive aspartokinase 3 low > 85
Klebsiella michiganensis M5al 0.50 BWI76_RS12705 ATP-dependent RNA helicase 0.54 BWI76_RS01790 lysine-sensitive aspartokinase 3 low > 92
Pantoea sp. MT58 0.49 IAI47_15055 ATP-dependent RNA helicase DbpA 0.53 IAI47_17960 lysine-sensitive aspartokinase 3 low > 76
Pantoea agglomerans CFBP13505 P0401 0.49 PagCFBP13505_RS10105 ATP-dependent RNA helicase DbpA 0.54 PagCFBP13505_RS22275 lysine-sensitive aspartokinase 3 low > 74
Erwinia tracheiphila HP pepo 2.2 0.48 IJEDHG_24880 dbpA ATP-dependent RNA helicase DbpA 0.53 IJEDHG_08510 lysC lysine-sensitive aspartokinase 3 low > 61
Erwinia tracheiphila SCR3 0.48 LU632_RS11995 dbpA ATP-dependent RNA helicase DbpA 0.53 LU632_RS22375 lysC lysine-sensitive aspartokinase 3 low > 73
Alteromonas macleodii MIT1002 0.45 MIT1002_03748 ATP-independent RNA helicase DbpA 0.48 MIT1002_00776 Lysine-sensitive aspartokinase 3 — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.36 CA264_06050 ATP-dependent RNA helicase 0.28 CA264_02395 aspartate kinase low > 74

Not shown: 46 genomes with orthologs for CSW01_12980 only; 8 genomes with orthologs for CSW01_02065 only