Conservation of cofitness between CSW01_03515 and CSW01_01985 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03515 DNA mismatch repair protein MutH 1.0 CSW01_01985 tRNA dihydrouridine(20/20a) synthase DusA 0.46 6
Erwinia tracheiphila HP pepo 2.2 0.68 IJEDHG_17110 mutH DNA mismatch repair endonuclease MutH 0.70 IJEDHG_11085 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 61
Erwinia tracheiphila SCR3 0.68 LU632_RS06095 mutH DNA mismatch repair endonuclease MutH 0.69 LU632_RS23765 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 74
Enterobacter asburiae PDN3 0.67 EX28DRAFT_2906 DNA mismatch repair protein MutH 0.75 EX28DRAFT_4263 tRNA dihydrouridine synthase A low > 76
Serratia liquefaciens MT49 0.67 IAI46_20460 DNA mismatch repair endonuclease MutH 0.77 IAI46_22970 tRNA dihydrouridine(20/20a) synthase DusA low > 86
Rahnella sp. WP5 0.66 EX31_RS13210 DNA mismatch repair endonuclease MutH 0.76 EX31_RS11865 tRNA dihydrouridine(20/20a) synthase DusA low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF1314 DNA mismatch repair endonuclease MutH 0.75 GFF1418 tRNA dihydrouridine synthase A (EC 1.-.-.-) low > 78
Pectobacterium carotovorum WPP14 0.66 HER17_RS16590 DNA mismatch repair endonuclease MutH 0.75 HER17_RS03680 tRNA dihydrouridine(20/20a) synthase DusA low > 75
Enterobacter sp. TBS_079 0.66 MPMX20_03694 DNA mismatch repair protein MutH 0.75 MPMX20_00265 tRNA-dihydrouridine(20/20a) synthase low > 85
Klebsiella pneumoniae MKP103 0.65 KDGMDA_03865 DNA mismatch repair endonuclease MutH 0.73 KDGMDA_10355 tRNA dihydrouridine(20/20a) synthase DusA low > 95
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS17060 DNA mismatch repair endonuclease MutH 0.75 PagCFBP13505_RS21190 tRNA dihydrouridine(20/20a) synthase DusA low > 74
Erwinia amylovora T8 0.65 OLJFJH_09040 DNA mismatch repair endonuclease MutH 0.76 OLJFJH_03475 tRNA dihydrouridine(20/20a) synthase DusA low > 58
Escherichia coli ECOR38 0.65 HEPCGN_19245 mutH DNA mismatch repair endonuclease MutH 0.75 HEPCGN_11560 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 88
Escherichia coli ECRC101 0.65 MCAODC_10515 mutH DNA mismatch repair endonuclease MutH 0.75 MCAODC_03455 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 88
Escherichia coli ECOR27 0.65 NOLOHH_11875 mutH DNA mismatch repair endonuclease MutH 0.75 NOLOHH_05195 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 76
Escherichia coli ECRC100 0.65 OKFHMN_19990 mutH DNA mismatch repair endonuclease MutH 0.75 OKFHMN_12945 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 79
Escherichia coli ECRC98 0.65 JDDGAC_23655 mutH DNA mismatch repair endonuclease MutH 0.75 JDDGAC_16580 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 87
Escherichia fergusonii Becca 0.65 EFB2_01052 DNA mismatch repair protein MutH 0.75 EFB2_04556 tRNA-dihydrouridine(20/20a) synthase low > 86
Escherichia coli ECRC102 0.65 NIAGMN_17760 mutH DNA mismatch repair endonuclease MutH 0.75 NIAGMN_10790 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 80
Escherichia coli ECRC99 0.65 KEDOAH_08140 mutH DNA mismatch repair endonuclease MutH 0.75 KEDOAH_15205 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli Nissle 1917 0.64 ECOLIN_RS15895 DNA mismatch repair endonuclease MutH 0.75 ECOLIN_RS23355 tRNA dihydrouridine(20/20a) synthase DusA low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00898 DNA mismatch repair protein MutH 0.75 OHPLBJKB_03994 tRNA-dihydrouridine(20/20a) synthase low > 74
Pantoea sp. MT58 0.64 IAI47_03910 DNA mismatch repair endonuclease MutH 0.76 IAI47_17865 tRNA dihydrouridine(20/20a) synthase DusA low > 76
Escherichia coli BW25113 0.64 b2831 mutH DNA mismatch repair protein (NCBI) 0.75 b4049 dusA tRNA-dihydrouridine synthase A (RefSeq) low > 76
Escherichia coli BL21 0.64 ECD_02679 methyl-directed mismatch repair protein 0.75 ECD_03921 tRNA-dihydrouridine synthase A low > 61
Klebsiella michiganensis M5al 0.64 BWI76_RS23290 DNA mismatch repair protein MutH 0.75 BWI76_RS01900 tRNA-dihydrouridine synthase A low > 92
Escherichia coli ECRC62 0.64 BNILDI_10355 mutH DNA mismatch repair endonuclease MutH 0.75 BNILDI_06330 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 75
Dickeya dianthicola 67-19 0.63 HGI48_RS04950 DNA mismatch repair endonuclease MutH 0.74 HGI48_RS17540 tRNA dihydrouridine(20/20a) synthase DusA — —
Dickeya dianthicola ME23 0.63 DZA65_RS05285 DNA mismatch repair endonuclease MutH 0.75 DZA65_RS18620 tRNA dihydrouridine(20/20a) synthase DusA low > 75
Dickeya dadantii 3937 0.63 DDA3937_RS04940 DNA mismatch repair endonuclease MutH 0.75 DDA3937_RS17480 tRNA dihydrouridine(20/20a) synthase DusA low > 74
Shewanella oneidensis MR-1 0.62 SO1330 mutH DNA mismatch repair protein MutH (NCBI ptt file) 0.72 SO3912 TIM-barrel protein, yjbN family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.61 Shewana3_3044 DNA mismatch repair protein (RefSeq) 0.73 Shewana3_0718 tRNA-dihydrouridine synthase A (RefSeq) low > 73
Shewanella loihica PV-4 0.60 Shew_1037 DNA mismatch repair protein (RefSeq) 0.72 Shew_0536 tRNA-dihydrouridine synthase A (RefSeq) low > 60
Shewanella amazonensis SB2B 0.59 Sama_0862 DNA mismatch repair protein (RefSeq) 0.71 Sama_3055 tRNA-dihydrouridine synthase A (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.53 MIT1002_00646 Methyl-directed mismatch repair protein 0.58 MIT1002_03387 putative tRNA-dihydrouridine synthase low > 70
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_0550 DNA mismatch repair protein MutH 0.63 B158DRAFT_2018 tRNA dihydrouridine synthase A low > 40

Not shown: 0 genomes with orthologs for CSW01_03515 only; 62 genomes with orthologs for CSW01_01985 only