Conservation of cofitness between CSW01_03480 and CSW01_01490 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03480 tRNA (adenosine(37)-N6)-methyltransferase TrmM 1.0 CSW01_01490 Fis family transcriptional regulator 0.51 5
Shewanella loihica PV-4 0.35 Shew_0768 methyltransferase small (RefSeq) 0.63 Shew_0329 Fis family transcriptional regulator (RefSeq) — —
Pantoea agglomerans CFBP13505 P0401 0.35 PagCFBP13505_RS14730 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.87 PagCFBP13505_RS10975 DNA-binding transcriptional regulator Fis — —
Shewanella sp. ANA-3 0.34 Shewana3_3333 methyltransferase small (RefSeq) 0.63 Shewana3_0398 fis DNA-binding protein Fis (RefSeq) — —
Pantoea sp. MT58 0.33 IAI47_04840 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.87 IAI47_02380 DNA-binding transcriptional regulator Fis low > 76
Dickeya dianthicola 67-19 0.33 HGI48_RS15860 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.85 HGI48_RS01290 DNA-binding transcriptional regulator Fis low > 71
Dickeya dianthicola ME23 0.33 DZA65_RS16940 methyltransferase 0.85 DZA65_RS01350 DNA-binding transcriptional regulator Fis low > 75
Pectobacterium carotovorum WPP14 0.33 HER17_RS05770 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.85 HER17_RS20240 DNA-binding transcriptional regulator Fis low > 75
Rahnella sp. WP5 0.32 EX31_RS21790 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.85 EX31_RS12175 DNA-binding transcriptional regulator Fis low > 89
Erwinia amylovora T8 0.32 OLJFJH_10205 SAM-dependent methyltransferase 0.87 OLJFJH_06850 DNA-binding transcriptional regulator Fis — —
Erwinia tracheiphila SCR3 0.32 LU632_RS15435 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.85 LU632_RS21515 fis DNA-binding transcriptional regulator Fis low > 73
Erwinia tracheiphila HP pepo 2.2 0.31 IJEDHG_01255 SAM-dependent methyltransferase 0.85 IJEDHG_13495 fis DNA-binding transcriptional regulator Fis — —
Dickeya dadantii 3937 0.31 DDA3937_RS15775 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.85 DDA3937_RS01370 DNA-binding transcriptional regulator Fis — —
Klebsiella pneumoniae MKP103 0.31 KDGMDA_28490 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.87 KDGMDA_06330 DNA-binding transcriptional regulator Fis — —
Enterobacter sp. TBS_079 0.31 MPMX20_03446 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.87 MPMX20_04170 DNA-binding protein Fis low > 85
Shewanella amazonensis SB2B 0.31 Sama_2741 hypothetical protein (RefSeq) 0.64 Sama_3226 fis DNA-binding protein Fis (RefSeq) — —
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0070 Predicted O-methyltransferase 0.87 EX28DRAFT_3314 Factor for inversion stimulation Fis, transcriptional activator low > 76
Serratia liquefaciens MT49 0.30 IAI46_19595 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.87 IAI46_22780 DNA-binding transcriptional regulator Fis — —
Escherichia coli ECRC102 0.30 NIAGMN_19135 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN 0.87 NIAGMN_15440 fis DNA-binding transcriptional regulator Fis low > 80
Escherichia coli ECRC98 0.30 JDDGAC_25030 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN 0.87 JDDGAC_21305 fis DNA-binding transcriptional regulator Fis — —
Escherichia coli ECRC99 0.30 KEDOAH_06855 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN 0.87 KEDOAH_10470 fis DNA-binding transcriptional regulator Fis — —
Escherichia coli ECRC100 0.30 OKFHMN_21365 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN 0.87 OKFHMN_17680 fis DNA-binding transcriptional regulator Fis low > 79
Escherichia coli Nissle 1917 0.30 ECOLIN_RS14575 tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN 0.87 ECOLIN_RS18730 DNA-binding transcriptional regulator Fis low > 55
Escherichia fergusonii Becca 0.30 EFB2_01321 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.87 EFB2_00563 DNA-binding protein Fis low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_01132 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.87 OHPLBJKB_00444 DNA-binding protein Fis — —
Escherichia coli ECRC101 0.30 MCAODC_11895 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN 0.87 MCAODC_08200 fis DNA-binding transcriptional regulator Fis low > 87
Escherichia coli BW25113 0.30 b2575 yfiC putative enzyme (VIMSS) 0.87 b3261 fis DNA-binding protein Fis (NCBI) low > 76
Escherichia coli BL21 0.30 ECD_02469 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.87 ECD_03119 global DNA-binding transcriptional dual regulator low > 61
Escherichia coli ECRC62 0.30 BNILDI_11840 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN 0.87 BNILDI_02055 fis DNA-binding transcriptional regulator Fis — —
Escherichia coli ECOR27 0.30 NOLOHH_13040 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN 0.87 NOLOHH_09465 fis DNA-binding transcriptional regulator Fis — —
Klebsiella michiganensis M5al 0.30 BWI76_RS21365 tRNA (adenosine(37)-N6)-methyltransferase TrmM 0.87 BWI76_RS25570 Fis family transcriptional regulator — —
Escherichia coli ECOR38 0.30 HEPCGN_20510 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN 0.87 HEPCGN_16500 fis DNA-binding transcriptional regulator Fis low > 88
Shewanella oneidensis MR-1 0.29 SO0948 conserved hypothetical protein (NCBI ptt file) 0.63 SO0393 fis DNA-binding protein Fis (NCBI ptt file) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF2105 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) 0.87 GFF2123 DNA-binding protein Fis — —
Alteromonas macleodii MIT1002 0.17 MIT1002_03442 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.60 MIT1002_03958 Hin recombinational enhancer-binding protein — —

Not shown: 11 genomes with orthologs for CSW01_03480 only; 4 genomes with orthologs for CSW01_01490 only