Conservation of cofitness between CSW01_18635 and CSW01_01485 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18635 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 1.0 CSW01_01485 transcriptional regulator 0.89 3
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS20525 NADP-dependent phosphogluconate dehydrogenase 0.29 QEN71_RS13585 LacI family DNA-binding transcriptional regulator low > 153
Dickeya dianthicola ME23 0.53 DZA65_RS07180 NADP-dependent phosphogluconate dehydrogenase 0.55 DZA65_RS20970 gluconate operon transcriptional repressor GntR low > 75
Escherichia coli ECRC62 0.52 BNILDI_14695 gndA NADP-dependent phosphogluconate dehydrogenase 0.52 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR 0.69 32
Pectobacterium carotovorum WPP14 0.52 HER17_RS14505 NADP-dependent phosphogluconate dehydrogenase 0.52 HER17_RS01450 gluconate operon transcriptional repressor GntR low > 75
Escherichia coli ECRC100 0.52 OKFHMN_24470 gndA NADP-dependent phosphogluconate dehydrogenase 0.52 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR low > 79
Escherichia coli ECRC98 0.52 JDDGAC_28580 gndA NADP-dependent phosphogluconate dehydrogenase 0.52 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli ECRC102 0.52 NIAGMN_22415 gndA NADP-dependent phosphogluconate dehydrogenase 0.52 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR low > 80
Escherichia coli BW25113 0.52 b2029 gnd 6-phosphogluconate dehydrogenase (NCBI) 0.52 b3438 gntR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECRC99 0.52 KEDOAH_03680 gndA NADP-dependent phosphogluconate dehydrogenase 0.52 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR
Escherichia coli ECRC101 0.52 MCAODC_20470 gndA NADP-dependent phosphogluconate dehydrogenase 0.52 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR low > 87
Dickeya dadantii 3937 0.52 DDA3937_RS06805 NADP-dependent phosphogluconate dehydrogenase 0.55 DDA3937_RS19785 gluconate operon transcriptional repressor GntR low > 74
Escherichia coli Nissle 1917 0.52 ECOLIN_RS11990 NADP-dependent phosphogluconate dehydrogenase 0.52 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR low > 55
Escherichia coli ECOR27 0.52 NOLOHH_15785 gndA NADP-dependent phosphogluconate dehydrogenase 0.51 NOLOHH_08635 gntR gluconate operon transcriptional repressor GntR low > 76
Serratia liquefaciens MT49 0.52 IAI46_08160 NADP-dependent phosphogluconate dehydrogenase 0.54 IAI46_23965 gluconate operon transcriptional repressor GntR low > 87
Escherichia coli BL21 0.52 ECD_01931 6-phosphogluconate dehydrogenase, decarboxylating 0.51 ECD_03289 d-gluconate inducible gluconate regulon transcriptional repressor low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01659 6-phosphogluconate dehydrogenase, decarboxylating 0.52 OHPLBJKB_00264 HTH-type transcriptional regulator GntR low > 74
Escherichia coli ECOR38 0.52 HEPCGN_03175 gndA NADP-dependent phosphogluconate dehydrogenase 0.52 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR low > 88
Klebsiella pneumoniae MKP103 0.52 KDGMDA_26195 NADP-dependent phosphogluconate dehydrogenase 0.51 KDGMDA_07120 gluconate operon transcriptional repressor GntR 0.56 76
Escherichia fergusonii Becca 0.52 EFB2_01826 6-phosphogluconate dehydrogenase, decarboxylating 0.52 EFB2_00382 HTH-type transcriptional regulator GntR low > 86
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_03046 6-phosphogluconate dehydrogenase (decarboxylating) 0.30 H281DRAFT_05920 transcriptional regulator, LacI family low > 103
Rahnella sp. WP5 0.52 EX31_RS11475 NADP-dependent phosphogluconate dehydrogenase 0.54 EX31_RS05060 gluconate operon transcriptional repressor GntR
Dickeya dianthicola 67-19 0.52 HGI48_RS06840 NADP-dependent phosphogluconate dehydrogenase 0.55 HGI48_RS19900 gluconate operon transcriptional repressor GntR low > 71
Klebsiella michiganensis M5al 0.52 BWI76_RS19025 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 0.51 BWI76_RS26245 transcriptional regulator low > 92
Enterobacter sp. TBS_079 0.51 MPMX20_03014 6-phosphogluconate dehydrogenase, decarboxylating 0.52 MPMX20_04319 HTH-type transcriptional regulator GntR low > 85
Variovorax sp. OAS795 0.51 ABID97_RS10190 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 0.29 ABID97_RS01205 LacI family DNA-binding transcriptional regulator low > 91
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF3903 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) 0.49 GFF570 Gluconate utilization system Gnt-I transcriptional repressor low > 78
Variovorax sp. SCN45 0.51 GFF2954 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) 0.30 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor low > 127
Enterobacter asburiae PDN3 0.51 EX28DRAFT_0529 6-phosphogluconate dehydrogenase (decarboxylating) 0.51 EX28DRAFT_4274 transcriptional regulator, LacI family low > 76
Erwinia amylovora T8 0.51 OLJFJH_12140 NADP-dependent phosphogluconate dehydrogenase 0.56 OLJFJH_04280 gluconate operon transcriptional repressor GntR
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS29625 6-phosphogluconate dehydrogenase 0.32 BPHYT_RS00410 LacI family transcription regulator low > 109
Erwinia tracheiphila HP pepo 2.2 0.50 IJEDHG_19020 gndA NADP-dependent phosphogluconate dehydrogenase 0.54 IJEDHG_08040 gntR gluconate operon transcriptional repressor GntR
Pantoea sp. MT58 0.50 IAI47_07035 NADP-dependent phosphogluconate dehydrogenase 0.52 IAI47_01650 gluconate operon transcriptional repressor GntR
Pantoea agglomerans CFBP13505 P0401 0.50 PagCFBP13505_RS01160 NADP-dependent phosphogluconate dehydrogenase 0.50 PagCFBP13505_RS18155 gluconate operon transcriptional repressor GntR
Erwinia tracheiphila SCR3 0.50 LU632_RS08890 gndA NADP-dependent phosphogluconate dehydrogenase 0.53 LU632_RS19160 gntR gluconate operon transcriptional repressor GntR low > 73
Rhizobium sp. OAE497 0.43 ABIE40_RS11035 NADP-dependent phosphogluconate dehydrogenase 0.25 ABIE40_RS04445 LacI family DNA-binding transcriptional regulator low > 107
Alteromonas macleodii MIT1002 0.42 MIT1002_02397 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating 0.31 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor low > 70
Agrobacterium fabrum C58 0.42 Atu1526 6-phosphogluconate dehydrogenase, decarboxylating 0.28 Atu4685 LacI family transcriptional regulator low > 89
Sinorhizobium meliloti 1021 0.41 SMc04262 6-phosphogluconate dehydrogenase 0.29 SM_b20667 LacI family transcriptional regulator low > 103
Azospirillum brasilense Sp245 0.41 AZOBR_RS15725 6-phosphogluconate dehydrogenase 0.31 AZOBR_RS15720 LacI family transcription regulator

Not shown: 21 genomes with orthologs for CSW01_18635 only; 36 genomes with orthologs for CSW01_01485 only