| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_18635 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 1.0 | CSW01_01485 | | transcriptional regulator | 0.89 | 3 |
| Paraburkholderia sabiae LMG 24235 | 0.53 | QEN71_RS20525 | | NADP-dependent phosphogluconate dehydrogenase | 0.29 | QEN71_RS13585 | | LacI family DNA-binding transcriptional regulator | low | > 153 |
| Dickeya dianthicola ME23 | 0.53 | DZA65_RS07180 | | NADP-dependent phosphogluconate dehydrogenase | 0.55 | DZA65_RS20970 | | gluconate operon transcriptional repressor GntR | low | > 75 |
| Escherichia coli ECRC62 | 0.52 | BNILDI_14695 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.52 | BNILDI_02870 | gntR | gluconate operon transcriptional repressor GntR | 0.69 | 32 |
| Pectobacterium carotovorum WPP14 | 0.52 | HER17_RS14505 | | NADP-dependent phosphogluconate dehydrogenase | 0.52 | HER17_RS01450 | | gluconate operon transcriptional repressor GntR | low | > 75 |
| Escherichia coli ECRC100 | 0.52 | OKFHMN_24470 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.52 | OKFHMN_16835 | gntR | gluconate operon transcriptional repressor GntR | low | > 79 |
| Escherichia coli ECRC98 | 0.52 | JDDGAC_28580 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.52 | JDDGAC_20465 | gntR | gluconate operon transcriptional repressor GntR | low | > 87 |
| Escherichia coli ECRC102 | 0.52 | NIAGMN_22415 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.52 | NIAGMN_14605 | gntR | gluconate operon transcriptional repressor GntR | low | > 80 |
| Escherichia coli BW25113 | 0.52 | b2029 | gnd | 6-phosphogluconate dehydrogenase (NCBI) | 0.52 | b3438 | gntR | DNA-binding transcriptional repressor (NCBI) | low | > 76 |
| Escherichia coli ECRC99 | 0.52 | KEDOAH_03680 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.52 | KEDOAH_11305 | gntR | gluconate operon transcriptional repressor GntR | — | — |
| Escherichia coli ECRC101 | 0.52 | MCAODC_20470 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.52 | MCAODC_07365 | gntR | gluconate operon transcriptional repressor GntR | low | > 87 |
| Dickeya dadantii 3937 | 0.52 | DDA3937_RS06805 | | NADP-dependent phosphogluconate dehydrogenase | 0.55 | DDA3937_RS19785 | | gluconate operon transcriptional repressor GntR | low | > 74 |
| Escherichia coli Nissle 1917 | 0.52 | ECOLIN_RS11990 | | NADP-dependent phosphogluconate dehydrogenase | 0.52 | ECOLIN_RS19675 | | gluconate operon transcriptional repressor GntR | low | > 55 |
| Escherichia coli ECOR27 | 0.52 | NOLOHH_15785 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.51 | NOLOHH_08635 | gntR | gluconate operon transcriptional repressor GntR | low | > 76 |
| Serratia liquefaciens MT49 | 0.52 | IAI46_08160 | | NADP-dependent phosphogluconate dehydrogenase | 0.54 | IAI46_23965 | | gluconate operon transcriptional repressor GntR | low | > 87 |
| Escherichia coli BL21 | 0.52 | ECD_01931 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.51 | ECD_03289 | | d-gluconate inducible gluconate regulon transcriptional repressor | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.52 | OHPLBJKB_01659 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.52 | OHPLBJKB_00264 | | HTH-type transcriptional regulator GntR | low | > 74 |
| Escherichia coli ECOR38 | 0.52 | HEPCGN_03175 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.52 | HEPCGN_15660 | gntR | gluconate operon transcriptional repressor GntR | low | > 88 |
| Klebsiella pneumoniae MKP103 | 0.52 | KDGMDA_26195 | | NADP-dependent phosphogluconate dehydrogenase | 0.51 | KDGMDA_07120 | | gluconate operon transcriptional repressor GntR | 0.56 | 76 |
| Escherichia fergusonii Becca | 0.52 | EFB2_01826 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.52 | EFB2_00382 | | HTH-type transcriptional regulator GntR | low | > 86 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.52 | H281DRAFT_03046 | | 6-phosphogluconate dehydrogenase (decarboxylating) | 0.30 | H281DRAFT_05920 | | transcriptional regulator, LacI family | low | > 103 |
| Rahnella sp. WP5 | 0.52 | EX31_RS11475 | | NADP-dependent phosphogluconate dehydrogenase | 0.54 | EX31_RS05060 | | gluconate operon transcriptional repressor GntR | — | — |
| Dickeya dianthicola 67-19 | 0.52 | HGI48_RS06840 | | NADP-dependent phosphogluconate dehydrogenase | 0.55 | HGI48_RS19900 | | gluconate operon transcriptional repressor GntR | low | > 71 |
| Klebsiella michiganensis M5al | 0.52 | BWI76_RS19025 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 0.51 | BWI76_RS26245 | | transcriptional regulator | low | > 92 |
| Enterobacter sp. TBS_079 | 0.51 | MPMX20_03014 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.52 | MPMX20_04319 | | HTH-type transcriptional regulator GntR | low | > 85 |
| Variovorax sp. OAS795 | 0.51 | ABID97_RS10190 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | 0.29 | ABID97_RS01205 | | LacI family DNA-binding transcriptional regulator | low | > 91 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.51 | GFF3903 | | 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | 0.49 | GFF570 | | Gluconate utilization system Gnt-I transcriptional repressor | low | > 78 |
| Variovorax sp. SCN45 | 0.51 | GFF2954 | | 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | 0.30 | GFF7257 | | KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor | low | > 127 |
| Enterobacter asburiae PDN3 | 0.51 | EX28DRAFT_0529 | | 6-phosphogluconate dehydrogenase (decarboxylating) | 0.51 | EX28DRAFT_4274 | | transcriptional regulator, LacI family | low | > 76 |
| Erwinia amylovora T8 | 0.51 | OLJFJH_12140 | | NADP-dependent phosphogluconate dehydrogenase | 0.56 | OLJFJH_04280 | | gluconate operon transcriptional repressor GntR | — | — |
| Burkholderia phytofirmans PsJN | 0.50 | BPHYT_RS29625 | | 6-phosphogluconate dehydrogenase | 0.32 | BPHYT_RS00410 | | LacI family transcription regulator | low | > 109 |
| Erwinia tracheiphila HP pepo 2.2 | 0.50 | IJEDHG_19020 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.54 | IJEDHG_08040 | gntR | gluconate operon transcriptional repressor GntR | — | — |
| Pantoea sp. MT58 | 0.50 | IAI47_07035 | | NADP-dependent phosphogluconate dehydrogenase | 0.52 | IAI47_01650 | | gluconate operon transcriptional repressor GntR | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.50 | PagCFBP13505_RS01160 | | NADP-dependent phosphogluconate dehydrogenase | 0.50 | PagCFBP13505_RS18155 | | gluconate operon transcriptional repressor GntR | — | — |
| Erwinia tracheiphila SCR3 | 0.50 | LU632_RS08890 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.53 | LU632_RS19160 | gntR | gluconate operon transcriptional repressor GntR | low | > 73 |
| Rhizobium sp. OAE497 | 0.43 | ABIE40_RS11035 | | NADP-dependent phosphogluconate dehydrogenase | 0.25 | ABIE40_RS04445 | | LacI family DNA-binding transcriptional regulator | low | > 107 |
| Alteromonas macleodii MIT1002 | 0.42 | MIT1002_02397 | | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating | 0.31 | MIT1002_03475 | | Gluconate utilization system GNT-I transcriptional repressor | low | > 70 |
| Agrobacterium fabrum C58 | 0.42 | Atu1526 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.28 | Atu4685 | | LacI family transcriptional regulator | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.41 | SMc04262 | | 6-phosphogluconate dehydrogenase | 0.29 | SM_b20667 | | LacI family transcriptional regulator | low | > 103 |
| Azospirillum brasilense Sp245 | 0.41 | AZOBR_RS15725 | | 6-phosphogluconate dehydrogenase | 0.31 | AZOBR_RS15720 | | LacI family transcription regulator | — | — |
Not shown: 21 genomes with orthologs for CSW01_18635 only; 36 genomes with orthologs for CSW01_01485 only