Conservation of cofitness between CSW01_11280 and CSW01_01175 in Vibrio cholerae E7946 ATCC 55056

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11280 TonB-dependent siderophore receptor 1.0 CSW01_01175 formamidopyrimidine-DNA glycosylase 0.54 9
Serratia liquefaciens MT49 0.41 IAI46_04475 TonB-dependent receptor 0.59 IAI46_24810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 87
Rhodospirillum rubrum S1H 0.20 Rru_A2312 TonB-dependent receptor (NCBI) 0.39 Rru_A3799 DNA-formamidopyrimidine glycosylase (NCBI) low > 58
Pseudomonas aeruginosa PUPa3 0.19 DQ20_RS49110 TonB-dependent receptor 0.53 DQ20_RS37540 mutM;go_function=nucleic bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 101
Pseudomonas aeruginosa PA14 0.19 IKLFDK_21400 TonB dependent receptor 0.53 IKLFDK_23650 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 98
Pseudomonas aeruginosa MRSN321 0.19 DY961_RS28265 TonB-dependent receptor 0.53 DY961_RS21755 mutM;go_function=nucleic bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 100
Shewanella sp. ANA-3 0.18 Shewana3_3923 TonB-dependent receptor (RefSeq) 0.57 Shewana3_4084 formamidopyrimidine-DNA glycosylase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.18 SO4516 viuA ferric vibriobactin receptor (NCBI ptt file) 0.60 SO4726 mutM formamidopyrimidine-DNA glycosylase (NCBI ptt file) low > 76
Agrobacterium fabrum C58 0.12 Atu3687 TonB-dependent receptor 0.34 Atu0321 formamidopyrimidine-DNA glycosylase low > 89
Pseudomonas sp. RS175 0.12 PFR28_02083 Pesticin receptor 0.53 PFR28_04272 Formamidopyrimidine-DNA glycosylase low > 88
Pseudomonas lactucae CFBP13502 0.11 GEMAOFIL_02447 Pesticin receptor 0.51 GEMAOFIL_05511 Formamidopyrimidine-DNA glycosylase 0.56 66
Pseudomonas fluorescens FW300-N2C3 0.11 AO356_24290 energy transducer TonB 0.50 AO356_13270 5-hydroxymethyluracil DNA glycosylase low > 104
Pseudomonas fluorescens SBW25 0.10 PFLU_RS15680 TonB-dependent receptor 0.51 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 109
Pseudomonas fluorescens SBW25-INTG 0.10 PFLU_RS15680 TonB-dependent receptor 0.51 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 109
Shewanella amazonensis SB2B 0.09 Sama_1451 TonB-dependent receptor (RefSeq) 0.58 Sama_0117 formamidopyrimidine-DNA glycosylase (RefSeq) low > 62
Shewanella loihica PV-4 0.09 Shew_1735 TonB-dependent receptor (RefSeq) 0.58 Shew_3690 formamidopyrimidine-DNA glycosylase (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2E2 0.08 Pf6N2E2_1020 TonB-dependent receptor 0.50 Pf6N2E2_4569 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) low > 103
Pseudomonas sp. BP01 0.07 JOY50_RS04540 TonB-dependent receptor 0.52 JOY50_RS20760 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase — —
Kangiella aquimarina DSM 16071 0.07 B158DRAFT_1786 Outer membrane receptor proteins, mostly Fe transport 0.52 B158DRAFT_0778 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) low > 40
Pseudomonas sp. SVBP6 0.05 COO64_RS24930 TonB-dependent receptor 0.53 COO64_RS12835 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 93

Not shown: 1 genomes with orthologs for CSW01_11280 only; 86 genomes with orthologs for CSW01_01175 only