Conservation of cofitness between CSW01_07515 and CSW01_01125 in Vibrio cholerae E7946 ATCC 55056

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07515 tail-specific protease 1.0 CSW01_01125 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase 0.76 4
Shewanella loihica PV-4 0.60 Shew_1802 carboxy-terminal protease (RefSeq) 0.30 Shew_2213 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.59 Sama_1585 carboxy-terminal protease (RefSeq) 0.33 Sama_1950 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) low > 62
Shewanella sp. ANA-3 0.58 Shewana3_1778 carboxy-terminal protease (RefSeq) 0.30 Shewana3_1866 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.58 SO2601 carboxyl-terminal protease (NCBI ptt file) 0.30 SO2088 lipid A biosynthesis acyltransferase, putative (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.57 BWI76_RS17975 tail-specific protease 0.36 BWI76_RS18120 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS11690 carboxy terminal-processing peptidase 0.36 HER17_RS11795 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 75
Klebsiella pneumoniae MKP103 0.57 KDGMDA_25245 carboxy terminal-processing peptidase 0.35 KDGMDA_25385 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase LpxM — —
Serratia liquefaciens MT49 0.57 IAI46_10800 carboxy terminal-processing peptidase 0.38 IAI46_14595 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECRC98 0.57 JDDGAC_01040 prc carboxy terminal-processing peptidase 0.37 JDDGAC_00890 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 87
Escherichia coli ECRC102 0.57 NIAGMN_01595 prc carboxy terminal-processing peptidase 0.37 NIAGMN_01745 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 80
Escherichia coli Nissle 1917 0.57 ECOLIN_RS10190 carboxy terminal-processing peptidase 0.37 ECOLIN_RS10335 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECRC100 0.57 OKFHMN_26465 prc carboxy terminal-processing peptidase 0.37 OKFHMN_26315 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 79
Escherichia coli ECRC101 0.57 MCAODC_18940 prc carboxy terminal-processing peptidase 0.37 MCAODC_19090 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 87
Escherichia coli ECOR27 0.57 NOLOHH_16975 prc carboxy terminal-processing peptidase 0.37 NOLOHH_16755 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia fergusonii Becca 0.57 EFB2_02171 Tail-specific protease 0.37 EFB2_02087 Lipid A biosynthesis myristoyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_01901 Tail-specific protease 0.37 OHPLBJKB_01873 Lipid A biosynthesis myristoyltransferase — —
Escherichia coli BL21 0.57 ECD_01801 carboxy-terminal protease for penicillin-binding protein 3 0.37 ECD_01826 myristoyl-acyl carrier protein (ACP)-dependent acyltransferase low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF2845 Tail-specific protease precursor (EC 3.4.21.102) 0.36 GFF1634 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) low > 78
Escherichia coli ECRC99 0.57 KEDOAH_01640 prc carboxy terminal-processing peptidase 0.37 KEDOAH_01790 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli BW25113 0.57 b1830 prc carboxy-terminal protease for penicillin-binding protein 3 (NCBI) 0.37 b1855 lpxM lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) low > 76
Escherichia coli ECOR38 0.57 HEPCGN_04865 prc carboxy terminal-processing peptidase 0.37 HEPCGN_04720 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase 0.68 62
Escherichia coli ECRC62 0.57 BNILDI_15770 prc carboxy terminal-processing peptidase 0.37 BNILDI_15545 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Pantoea sp. MT58 0.56 IAI47_08705 carboxy terminal-processing peptidase 0.37 IAI47_08475 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Dickeya dadantii 3937 0.56 DDA3937_RS11965 carboxy terminal-processing peptidase 0.37 DDA3937_RS10110 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Pantoea agglomerans CFBP13505 P0401 0.56 PagCFBP13505_RS02535 carboxy terminal-processing peptidase 0.37 PagCFBP13505_RS02355 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Erwinia tracheiphila SCR3 0.56 LU632_RS13250 prc carboxy terminal-processing peptidase 0.36 LU632_RS13385 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Erwinia amylovora T8 0.56 OLJFJH_13010 carboxy terminal-processing peptidase 0.38 OLJFJH_12885 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Dickeya dianthicola 67-19 0.56 HGI48_RS12055 carboxy terminal-processing peptidase 0.36 HGI48_RS10140 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 71
Erwinia tracheiphila HP pepo 2.2 0.56 IJEDHG_22325 prc carboxy terminal-processing peptidase 0.36 IJEDHG_22165 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Dickeya dianthicola ME23 0.56 DZA65_RS12505 carboxy terminal-processing peptidase 0.37 DZA65_RS10555 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 75
Enterobacter asburiae PDN3 0.55 EX28DRAFT_0726 C-terminal peptidase (prc) 0.36 EX28DRAFT_0701 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase — —
Enterobacter sp. TBS_079 0.55 MPMX20_02737 Tail-specific protease 0.36 MPMX20_02760 Lipid A biosynthesis myristoyltransferase — —
Rahnella sp. WP5 0.55 EX31_RS24880 carboxy terminal-processing peptidase 0.38 EX31_RS10665 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase 0.41 61

Not shown: 39 genomes with orthologs for CSW01_07515 only; 13 genomes with orthologs for CSW01_01125 only