Conservation of cofitness between CSW01_11905 and CSW01_00655 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11905 thymidine phosphorylase 1.0 CSW01_00655 2-haloalkanoic acid dehalogenase 0.47 13
Klebsiella michiganensis M5al 0.70 BWI76_RS04135 thymidine phosphorylase 0.45 BWI76_RS01215 flavin mononucleotide phosphatase — —
Pantoea sp. MT58 0.70 IAI47_03405 thymidine phosphorylase 0.43 IAI47_18395 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 76
Serratia liquefaciens MT49 0.70 IAI46_02915 thymidine phosphorylase 0.43 IAI46_00730 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 86
Enterobacter asburiae PDN3 0.70 EX28DRAFT_3591 thymidine phosphorylase (EC 2.4.2.4) 0.43 EX28DRAFT_4481 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E low > 76
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS16300 thymidine phosphorylase 0.42 PagCFBP13505_RS15375 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 74
Enterobacter sp. TBS_079 0.69 MPMX20_00681 Thymidine phosphorylase 0.42 MPMX20_04464 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF1044 Thymidine phosphorylase (EC 2.4.2.4) 0.43 GFF240 'Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase' transl_table=11 low > 78
Rahnella sp. WP5 0.69 EX31_RS04060 thymidine phosphorylase 0.39 EX31_RS15170 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 89
Escherichia coli ECRC98 0.68 JDDGAC_14820 deoA thymidine phosphorylase 0.42 JDDGAC_18040 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 87
Escherichia coli ECRC99 0.68 KEDOAH_16925 deoA thymidine phosphorylase 0.42 KEDOAH_13735 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB — —
Escherichia coli Nissle 1917 0.68 ECOLIN_RS25155 thymidine phosphorylase 0.42 ECOLIN_RS21880 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 55
Klebsiella pneumoniae MKP103 0.68 KDGMDA_12405 thymidine phosphorylase 0.43 KDGMDA_09705 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 95
Escherichia coli ECOR38 0.68 HEPCGN_09230 deoA thymidine phosphorylase 0.42 HEPCGN_13120 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 88
Escherichia coli ECRC100 0.68 OKFHMN_11225 deoA thymidine phosphorylase 0.42 OKFHMN_14415 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 79
Escherichia coli ECRC101 0.68 MCAODC_01740 deoA thymidine phosphorylase 0.42 MCAODC_04920 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 88
Escherichia coli BW25113 0.68 b4382 deoA thymidine phosphorylase (NCBI) 0.42 b3812 yigB predicted hydrolase (NCBI) low > 76
Escherichia coli BL21 0.68 ECD_04258 thymidine phosphorylase 0.42 ECD_03688 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03679 Thymidine phosphorylase 0.42 OHPLBJKB_04238 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 74
Escherichia coli ECOR27 0.68 NOLOHH_03555 deoA thymidine phosphorylase 0.42 NOLOHH_06545 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 76
Escherichia coli ECRC62 0.68 BNILDI_08040 deoA thymidine phosphorylase 0.42 BNILDI_04990 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 75
Escherichia fergusonii Becca 0.68 EFB2_04064 Thymidine phosphorylase 0.42 EFB2_04825 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 86
Escherichia coli ECRC102 0.68 NIAGMN_09075 deoA thymidine phosphorylase 0.42 NIAGMN_12170 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 80
Dickeya dianthicola ME23 0.68 DZA65_RS03310 thymidine phosphorylase 0.37 DZA65_RS21085 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 75
Dickeya dadantii 3937 0.68 DDA3937_RS03140 thymidine phosphorylase 0.36 DDA3937_RS19885 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 74
Pectobacterium carotovorum WPP14 0.68 HER17_RS18130 thymidine phosphorylase 0.42 HER17_RS01355 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 75
Shewanella loihica PV-4 0.68 Shew_2814 deoA thymidine phosphorylase (RefSeq) 0.35 Shew_0326 HAD family hydrolase (RefSeq) low > 60
Dickeya dianthicola 67-19 0.67 HGI48_RS03315 thymidine phosphorylase 0.37 HGI48_RS20040 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 71
Shewanella oneidensis MR-1 0.66 SO1218 deoA thymidine phosphorylase (NCBI ptt file) 0.32 SO4305 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.65 Sama_0974 deoA thymidine phosphorylase (RefSeq) 0.32 Sama_3246 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (RefSeq) low > 62
Erwinia amylovora T8 0.65 OLJFJH_01620 thymidine phosphorylase 0.44 OLJFJH_06420 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB low > 58
Shewanella sp. ANA-3 0.64 Shewana3_1042 deoA thymidine phosphorylase (RefSeq) 0.31 Shewana3_0394 HAD family hydrolase (RefSeq) low > 73
Variovorax sp. SCN45 0.43 GFF4164 Thymidine phosphorylase (EC 2.4.2.4) 0.22 GFF502 Hydrolase low > 127
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS13930 thymidine phosphorylase 0.23 LRK54_RS06440 HAD family hydrolase low > 59
Rhodanobacter sp000427505 FW510-R12 0.39 LRK53_RS14680 thymidine phosphorylase 0.23 LRK53_RS17730 HAD family hydrolase low > 59

Not shown: 8 genomes with orthologs for CSW01_11905 only; 32 genomes with orthologs for CSW01_00655 only