Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Klebsiella michiganensis M5al | 1.0 | BWI76_RS05165 | | cobalamin-binding protein | 1.0 | BWI76_RS00985 | | transcriptional regulator IlvY | 0.36 | 8 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.76 | GFF63 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.92 | GFF2897 | | HTH-type transcriptional regulator IlvY | low | > 78 |
Escherichia coli ECRC101 | 0.74 | MCAODC_00785 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.92 | MCAODC_05135 | ilvY | HTH-type transcriptional activator IlvY | low | > 87 |
Escherichia fergusonii Becca | 0.74 | EFB2_03886 | | Vitamin B12-binding protein | 0.92 | EFB2_04863 | | HTH-type transcriptional regulator HdfR | low | > 86 |
Escherichia coli ECOR27 | 0.74 | NOLOHH_02615 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.92 | NOLOHH_06765 | ilvY | HTH-type transcriptional activator IlvY | low | > 75 |
Escherichia coli ECRC99 | 0.74 | KEDOAH_17885 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.92 | KEDOAH_13520 | ilvY | HTH-type transcriptional activator IlvY | — | — |
Escherichia coli ECRC62 | 0.74 | BNILDI_09055 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.92 | BNILDI_04760 | ilvY | HTH-type transcriptional activator IlvY | low | > 75 |
Escherichia coli ECRC102 | 0.74 | NIAGMN_08120 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.92 | NIAGMN_12385 | ilvY | HTH-type transcriptional activator IlvY | — | — |
Escherichia coli BW25113 | 0.74 | b0158 | btuF | vitamin B12-transporter protein BtuF (NCBI) | 0.93 | b3773 | ilvY | DNA-binding transcriptional dual regulator (NCBI) | low | > 76 |
Escherichia coli ECRC98 | 0.74 | JDDGAC_13865 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.92 | JDDGAC_18250 | ilvY | HTH-type transcriptional activator IlvY | low | > 86 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.74 | OHPLBJKB_03504 | | Vitamin B12-binding protein | 0.93 | OHPLBJKB_04280 | | HTH-type transcriptional regulator GltC | low | > 73 |
Escherichia coli ECRC100 | 0.74 | OKFHMN_10270 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.92 | OKFHMN_14630 | ilvY | HTH-type transcriptional activator IlvY | low | > 80 |
Escherichia coli BL21 | 0.74 | ECD_00157 | | vitamin B12 ABC transporter periplasmic binding protein | 0.93 | ECD_03651 | | transcriptional activator of ilvC; autorepressor | low | > 61 |
Escherichia coli ECOR38 | 0.74 | HEPCGN_08220 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.92 | HEPCGN_13340 | ilvY | HTH-type transcriptional activator IlvY | 0.59 | 52 |
Enterobacter sp. TBS_079 | 0.74 | MPMX20_00844 | | Vitamin B12-binding protein | 0.92 | MPMX20_04497 | | HTH-type transcriptional regulator GltC | 0.30 | 36 |
Escherichia coli Nissle 1917 | 0.74 | ECOLIN_RS00880 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.92 | ECOLIN_RS21675 | | HTH-type transcriptional activator IlvY | — | — |
Enterobacter asburiae PDN3 | 0.70 | EX28DRAFT_3747 | | ABC-type Fe3+-hydroxamate transport system, periplasmic component | 0.92 | EX28DRAFT_4445 | | Transcriptional regulator | low | > 76 |
Serratia liquefaciens MT49 | 0.56 | IAI46_03570 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.71 | IAI46_24330 | | HTH-type transcriptional activator IlvY | low | > 86 |
Rahnella sp. WP5 | 0.52 | EX31_RS03185 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.74 | EX31_RS15015 | | HTH-type transcriptional activator IlvY | 0.71 | 13 |
Dickeya dadantii 3937 | 0.51 | DDA3937_RS15875 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.67 | DDA3937_RS20135 | | HTH-type transcriptional activator IlvY | low | > 74 |
Pantoea sp. MT58 | 0.50 | IAI47_15575 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.72 | IAI47_01045 | | HTH-type transcriptional activator IlvY | low | > 76 |
Dickeya dianthicola 67-19 | 0.50 | HGI48_RS16015 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.67 | HGI48_RS20275 | | HTH-type transcriptional activator IlvY | low | > 71 |
Dickeya dianthicola ME23 | 0.50 | DZA65_RS17100 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.67 | DZA65_RS21315 | | HTH-type transcriptional activator IlvY | 0.35 | 62 |
Pectobacterium carotovorum WPP14 | 0.50 | HER17_RS05645 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.70 | HER17_RS01095 | | HTH-type transcriptional activator IlvY | low | > 75 |
Vibrio cholerae E7946 ATCC 55056 | 0.37 | CSW01_12055 | | cobalamin-binding protein | 0.45 | CSW01_00835 | | HTH-type transcriptional activator IlvY | low | > 62 |
Shewanella sp. ANA-3 | 0.28 | Shewana3_3272 | | periplasmic binding protein (RefSeq) | 0.53 | Shewana3_0354 | | DNA-binding transcriptional regulator IlvY (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.28 | SO3709 | | ABC transporter, periplasmic substrate-binding protein, putative (NCBI ptt file) | 0.53 | SO4350 | ilvY | transcriptional regulator ilvY (NCBI ptt file) | 0.66 | 22 |
Shewanella amazonensis SB2B | 0.27 | Sama_2869 | | ABC transporter, periplasmic substrate-binding protein, putative (RefSeq) | 0.48 | Sama_3283 | | DNA-binding transcriptional regulator IlvY (RefSeq) | low | > 62 |
Shewanella loihica PV-4 | 0.26 | Shew_0719 | | periplasmic binding protein (RefSeq) | 0.51 | Shew_0287 | | DNA-binding transcriptional regulator IlvY (RefSeq) | 0.68 | 48 |
Pseudomonas sp. S08-1 | 0.19 | OH686_15750 | | Vitamin B12 ABC transporter, substrate-binding protein BtuF | 0.40 | OH686_08120 | | Transcriptional regulator IlvY, LysR family | low | > 80 |
Pseudomonas stutzeri RCH2 | 0.19 | Psest_3542 | | ABC-type Fe3+-hydroxamate transport system, periplasmic component | 0.16 | Psest_2671 | | Transcriptional regulator | low | > 67 |
Variovorax sp. SCN45 | 0.14 | GFF447 | | Vitamin B12 ABC transporter, substrate-binding protein BtuF | 0.17 | GFF1571 | | Transcriptional regulator, LysR family | low | > 127 |
Not shown: 27 genomes with orthologs for BWI76_RS05165 only; 2 genomes with orthologs for BWI76_RS00985 only