Conservation of cofitness between BPHYT_RS22685 and BPHYT_RS24690 in Burkholderia phytofirmans PsJN

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS22685 shikimate 5-dehydrogenase 1.0 BPHYT_RS24690 ionic transporter y4hA 0.27 2
Paraburkholderia graminis OAS925 0.83 ABIE53_004075 shikimate dehydrogenase 0.72 ABIE53_006421 Ca2+:H+ antiporter low > 113
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_03216 shikimate dehydrogenase (EC 1.1.1.25) 0.84 H281DRAFT_05410 Ca2+:H+ antiporter low > 103
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_5061 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) 0.28 Pf6N2E2_3474 Calcium/proton antiporter low > 103
Pseudomonas sp. RS175 0.54 PFR28_03811 Quinate/shikimate dehydrogenase (NAD(+)) 0.26 PFR28_05254 Sodium-potassium/proton antiporter ChaA low > 88
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS26360 shikimate dehydrogenase 0.27 PFLU_RS03290 calcium:proton antiporter low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS26360 shikimate dehydrogenase 0.27 PFLU_RS03290 calcium:proton antiporter low > 109
Pseudomonas simiae WCS417 0.53 PS417_24435 shikimate dehydrogenase 0.27 PS417_03210 calcium:proton antiporter low > 88
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_15590 shikimate dehydrogenase 0.28 AO356_08010 calcium:proton antiporter low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_2132 shikimate dehydrogenase 0.28 Psyr_0668 Sodium/calcium exchanger membrane region low > 86
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_2132 shikimate dehydrogenase 0.28 Psyr_0668 Sodium/calcium exchanger membrane region low > 86
Sinorhizobium meliloti 1021 0.50 SM_b20037 shikimate 5-dehydrogenase 0.22 SMc02224 calcium/proton antiporter transmembrane protein low > 103
Agrobacterium fabrum C58 0.44 Atu4532 shikimate 5-dehydrogenase 0.25 Atu2195 Ca2+/H+ antiporter low > 89
Bosea sp. OAE506 0.28 ABIE41_RS20015 shikimate dehydrogenase 0.31 ABIE41_RS06070 calcium:proton antiporter low > 77
Klebsiella michiganensis M5al 0.22 BWI76_RS04655 shikimate dehydrogenase 0.29 BWI76_RS17410 sodium-potassium/proton antiporter ChaA low > 92
Escherichia coli BW25113 0.20 b1692 ydiB quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) 0.29 b1216 chaA calcium/sodium:proton antiporter (NCBI) low > 76
Escherichia coli ECRC99 0.20 KEDOAH_00910 ydiB quinate/shikimate dehydrogenase 0.28 KEDOAH_25490 chaA sodium-potassium/proton antiporter ChaA — —
Escherichia coli ECRC102 0.20 NIAGMN_00865 ydiB quinate/shikimate dehydrogenase 0.28 NIAGMN_27740 chaA sodium-potassium/proton antiporter ChaA — —
Escherichia coli ECRC100 0.20 OKFHMN_27200 ydiB quinate/shikimate dehydrogenase 0.28 OKFHMN_28495 chaA sodium-potassium/proton antiporter ChaA low > 80
Escherichia coli ECRC98 0.20 JDDGAC_01775 ydiB quinate/shikimate dehydrogenase 0.28 JDDGAC_06080 chaA sodium-potassium/proton antiporter ChaA low > 86
Escherichia coli ECRC101 0.20 MCAODC_18210 ydiB quinate/shikimate dehydrogenase 0.28 MCAODC_21765 chaA sodium-potassium/proton antiporter ChaA low > 87
Escherichia coli Nissle 1917 0.20 ECOLIN_RS09455 quinate/shikimate dehydrogenase 0.29 ECOLIN_RS07350 sodium-potassium/proton antiporter ChaA low > 55
Escherichia coli ECRC62 0.20 BNILDI_16510 ydiB quinate/shikimate dehydrogenase 0.28 BNILDI_18710 chaA sodium-potassium/proton antiporter ChaA low > 75
Escherichia coli BL21 0.20 ECD_01661 quinate/shikimate 5-dehydrogenase, NAD(P)-binding 0.28 ECD_01194 calcium/sodium:proton antiporter — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_02032 Quinate/shikimate dehydrogenase 0.28 OHPLBJKB_02468 Sodium-potassium/proton antiporter ChaA low > 73
Escherichia coli ECOR27 0.20 NOLOHH_17720 ydiB quinate/shikimate dehydrogenase 0.28 NOLOHH_20560 chaA sodium-potassium/proton antiporter ChaA low > 75
Escherichia fergusonii Becca 0.20 EFB2_02300 Quinate/shikimate dehydrogenase 0.29 EFB2_02710 Sodium-potassium/proton antiporter ChaA low > 86
Escherichia coli ECOR38 0.20 HEPCGN_05585 ydiB quinate/shikimate dehydrogenase 0.29 HEPCGN_24955 chaA sodium-potassium/proton antiporter ChaA low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.17 GFF3549 Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282) 0.29 GFF2769 Calcium/proton antiporter low > 78
Rahnella sp. WP5 0.15 EX31_RS03145 shikimate 5-dehydrogenase 0.28 EX31_RS09385 sodium-potassium/proton antiporter ChaA low > 89
Serratia liquefaciens MT49 0.11 IAI46_21700 shikimate 5-dehydrogenase 0.29 IAI46_15690 sodium-potassium/proton antiporter ChaA low > 86

Not shown: 12 genomes with orthologs for BPHYT_RS22685 only; 16 genomes with orthologs for BPHYT_RS24690 only