Conservation of cofitness between BPHYT_RS16225 and BPHYT_RS18610 in Burkholderia phytofirmans PsJN

15 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16225 D-alanyl-D-alanine carboxypeptidase 1.0 BPHYT_RS18610 lytic transglycosylase 0.59 6
Paraburkholderia bryophila 376MFSha3.1 0.83 H281DRAFT_04181 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) 0.90 H281DRAFT_05816 soluble lytic murein transglycosylase 0.62 3
Paraburkholderia graminis OAS925 0.82 ABIE53_003419 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) 0.90 ABIE53_000044 soluble lytic murein transglycosylase 0.73 1
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS02470 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.89 QEN71_RS28635 lytic transglycosylase domain-containing protein 0.72 2
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS03245 D-alanyl-D-alanine carboxypeptidase 0.50 RR42_RS01405 lytic transglycosylase 0.33 44
Ralstonia solanacearum GMI1000 0.41 RS_RS02925 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.52 RS_RS00445 lytic transglycosylase low > 80
Ralstonia solanacearum UW163 0.41 UW163_RS01390 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.52 UW163_RS03720 lytic transglycosylase — —
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS12220 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.52 RALBFv3_RS09860 lytic transglycosylase low > 76
Ralstonia solanacearum PSI07 0.41 RPSI07_RS21110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.52 RPSI07_RS23510 lytic transglycosylase low > 81
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS08110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.52 ABZR87_RS04885 lytic transglycosylase domain-containing protein low > 80
Pseudomonas sp. RS175 0.27 PFR28_01057 D-alanyl-D-alanine carboxypeptidase DacC 0.17 PFR28_01106 Soluble lytic murein transglycosylase 0.53 2
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_02595 D-alanyl-D-alanine carboxypeptidase 0.17 AO356_02350 lytic transglycosylase 0.36 42
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_2344 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.17 Pf6N2E2_2294 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.57 3
Acidovorax sp. GW101-3H11 0.25 Ac3H11_670 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.30 Ac3H11_1834 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.26 77
Variovorax sp. SCN45 0.24 GFF5516 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.30 GFF5163 Soluble lytic murein transglycosylase (EC 4.2.2.n1) low > 127
Shewanella oneidensis MR-1 0.09 SO2394 dacB penicillin-binding protein 4 (NCBI ptt file) 0.12 SO2040 soluble lytic murein transglycosylase, putative (NCBI ptt file) low > 76

Not shown: 2 genomes with orthologs for BPHYT_RS16225 only; 52 genomes with orthologs for BPHYT_RS18610 only