Conservation of cofitness between BNILDI_04105 and BNILDI_08460 in Escherichia coli ECRC62

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_04105 xanP xanthine/proton symporter XanP 1.0 BNILDI_08460 rapA RNA polymerase-associated protein RapA 0.81 18
Escherichia coli ECRC98 1.00 JDDGAC_19155 xanP xanthine/proton symporter XanP 1.00 JDDGAC_14395 rapA RNA polymerase-associated protein RapA low > 86
Escherichia coli BL21 1.00 ECD_03512 xanthine permease 1.00 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase low > 61
Escherichia coli ECRC102 1.00 NIAGMN_13290 xanP xanthine/proton symporter XanP 1.00 NIAGMN_08650 rapA RNA polymerase-associated protein RapA — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20810 xanthine/proton symporter XanP 1.00 ECOLIN_RS00315 RNA polymerase-associated protein RapA low > 55
Escherichia coli ECRC101 1.00 MCAODC_06040 xanP xanthine/proton symporter XanP 1.00 MCAODC_01315 rapA RNA polymerase-associated protein RapA low > 87
Escherichia fergusonii Becca 1.00 EFB2_00134 Xanthine permease XanP 1.00 EFB2_03986 RNA polymerase-associated protein RapA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00047 Xanthine permease XanP 1.00 OHPLBJKB_03599 RNA polymerase-associated protein RapA low > 73
Escherichia coli ECOR38 1.00 HEPCGN_14355 xanP xanthine/proton symporter XanP 1.00 HEPCGN_08790 rapA RNA polymerase-associated protein RapA low > 87
Escherichia coli ECRC100 1.00 OKFHMN_15530 xanP xanthine/proton symporter XanP 1.00 OKFHMN_10800 rapA RNA polymerase-associated protein RapA low > 80
Escherichia coli BW25113 1.00 b3654 yicE predicted transporter (NCBI) 1.00 b0059 hepA ATP-dependent helicase HepA (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_07415 xanP xanthine/proton symporter XanP 1.00 NOLOHH_03145 rapA RNA polymerase-associated protein RapA low > 75
Escherichia coli ECRC99 1.00 KEDOAH_12615 xanP xanthine/proton symporter XanP 1.00 KEDOAH_17355 rapA RNA polymerase-associated protein RapA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF351 Xanthine permease 0.94 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) low > 78
Enterobacter asburiae PDN3 0.95 EX28DRAFT_3903 uracil-xanthine permease 0.92 EX28DRAFT_3651 Superfamily II DNA/RNA helicases, SNF2 family low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_00082 Xanthine permease XanP 0.92 MPMX20_00753 RNA polymerase-associated protein RapA low > 85
Klebsiella michiganensis M5al 0.94 BWI76_RS27525 xanthine permease XanP 0.92 BWI76_RS04570 RNA polymerase-associated protein RapA low > 92
Dickeya dadantii 3937 0.89 DDA3937_RS00165 uracil-xanthine permease 0.79 DDA3937_RS18235 RNA polymerase-associated protein RapA low > 74
Pantoea sp. MT58 0.87 IAI47_00495 uracil-xanthine permease 0.84 IAI47_16055 RNA polymerase-associated protein RapA low > 76
Dickeya dianthicola 67-19 0.85 HGI48_RS21195 uracil-xanthine permease 0.78 HGI48_RS18170 RNA polymerase-associated protein RapA low > 71
Dickeya dianthicola ME23 0.85 DZA65_RS22165 uracil-xanthine permease 0.78 DZA65_RS19310 RNA polymerase-associated protein RapA low > 75
Rahnella sp. WP5 0.85 EX31_RS15835 uracil-xanthine permease 0.80 EX31_RS03745 RNA polymerase-associated protein RapA low > 89
Serratia liquefaciens MT49 0.85 IAI46_24915 NCS2 family protein 0.84 IAI46_03275 RNA polymerase-associated protein RapA low > 86
Erwinia tracheiphila SCR3 0.84 LU632_RS22185 uracil-xanthine permease family protein 0.83 LU632_RS02805 rapA RNA polymerase-associated protein RapA low > 74
Pectobacterium carotovorum WPP14 0.83 HER17_RS21400 uracil-xanthine permease family protein 0.78 HER17_RS02990 RNA polymerase-associated protein RapA low > 75
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_13685 xanthine permease XanP 0.65 CSW01_12705 RNA polymerase-associated protein RapA low > 62
Acinetobacter radioresistens SK82 0.52 MPMX26_02490 Xanthine permease XanP 0.38 MPMX26_01027 RNA polymerase-associated protein RapA low > 36
Pseudomonas putida KT2440 0.52 PP_3992 xanthine permease 0.48 PP_1145 RNA polymerase-associated protein RapA low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0676 Xanthine/uracil permease family 0.48 Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0676 Xanthine/uracil permease family 0.48 Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit low > 86
Pseudomonas simiae WCS417 0.44 PS417_03235 xanthine permease XanP 0.47 PS417_06645 RNA polymerase-associated protein RapA low > 88
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS03315 purine permease 0.48 PFLU_RS06675 RNA polymerase-associated protein RapA low > 109
Pseudomonas fluorescens SBW25 0.44 PFLU_RS03315 purine permease 0.48 PFLU_RS06675 RNA polymerase-associated protein RapA low > 109
Pseudomonas stutzeri RCH2 0.44 Psest_1193 xanthine permease 0.48 Psest_1327 Superfamily II DNA/RNA helicases, SNF2 family low > 67
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_23860 xanthine permease XanP 0.48 AO353_17155 RNA polymerase-associated protein RapA low > 101
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_4713 Xanthine permease 0.48 Pf1N1B4_3224 RNA polymerase associated protein RapA (EC 3.6.1.-) low > 87
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_3236 Xanthine permease 0.48 PfGW456L13_4599 RNA polymerase associated protein RapA (EC 3.6.1.-) low > 87
Alteromonas macleodii MIT1002 0.42 MIT1002_01588 Xanthine permease XanP 0.44 MIT1002_00659 RNA polymerase-associated protein RapA low > 70

Not shown: 8 genomes with orthologs for BNILDI_04105 only; 13 genomes with orthologs for BNILDI_08460 only