| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Kangiella aquimarina DSM 16071 | 1.0 | B158DRAFT_0521 | | PEP-CTERM-box response regulator transcription factor | 1.0 | B158DRAFT_0413 | | Superfamily II DNA and RNA helicases | 0.73 | 18 |
| Alteromonas macleodii MIT1002 | 0.57 | MIT1002_03048 | | Transcriptional regulatory protein ZraR | 0.49 | MIT1002_00515 | | ATP-dependent RNA helicase RhlB | low | > 70 |
| Marinobacter adhaerens HP15 | 0.55 | HP15_1891 | | two component, sigma54 specific, transcriptional regulator, Fis family | 0.40 | HP15_2099 | | DEAD/DEAH box helicase domain protein | low | > 73 |
| Escherichia coli BW25113 | 0.35 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | 0.52 | b3780 | rhlB | ATP-dependent RNA helicase (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.35 | OHPLBJKB_01490 | | Regulatory protein AtoC | 0.52 | OHPLBJKB_04274 | | ATP-dependent RNA helicase RhlB | low | > 73 |
| Escherichia coli BL21 | 0.35 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | 0.52 | ECD_03658 | | ATP-dependent RNA helicase | low | > 61 |
| Escherichia coli ECOR38 | 0.35 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | 0.52 | HEPCGN_13310 | rhlB | ATP-dependent RNA helicase RhlB | low | > 87 |
| Escherichia fergusonii Becca | 0.35 | EFB2_01635 | | Regulatory protein AtoC | 0.52 | EFB2_04858 | | ATP-dependent RNA helicase RhlB | low | > 86 |
| Escherichia coli Nissle 1917 | 0.35 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | 0.52 | ECOLIN_RS21700 | | ATP-dependent RNA helicase RhlB | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.32 | GFF2455 | | Putative sensory histidine kinase YfhA | 0.52 | GFF2892 | | ATP-dependent RNA helicase RhlB | 0.91 | 18 |
| Escherichia coli ECRC62 | 0.32 | BNILDI_06055 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.52 | BNILDI_04790 | rhlB | ATP-dependent RNA helicase RhlB | low | > 75 |
| Escherichia coli ECRC101 | 0.32 | MCAODC_03820 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.52 | MCAODC_05105 | rhlB | ATP-dependent RNA helicase RhlB | low | > 87 |
| Escherichia coli ECRC99 | 0.32 | KEDOAH_14840 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.52 | KEDOAH_13550 | rhlB | ATP-dependent RNA helicase RhlB | — | — |
| Escherichia coli ECRC102 | 0.32 | NIAGMN_11070 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.51 | NIAGMN_12355 | rhlB | ATP-dependent RNA helicase RhlB | — | — |
| Dickeya dadantii 3937 | 0.32 | DDA3937_RS20820 | | two-component system response regulator VfmH | 0.51 | DDA3937_RS20080 | | ATP-dependent RNA helicase RhlB | low | > 74 |
| Klebsiella michiganensis M5al | 0.32 | BWI76_RS21250 | | two-component system response regulator GlrR | 0.51 | BWI76_RS01065 | | ATP-dependent RNA helicase RhlB | low | > 92 |
| Escherichia coli ECOR27 | 0.32 | NOLOHH_05465 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.52 | NOLOHH_06735 | rhlB | ATP-dependent RNA helicase RhlB | low | > 75 |
| Dickeya dianthicola ME23 | 0.32 | DZA65_RS00425 | | sigma-54-dependent Fis family transcriptional regulator | 0.51 | DZA65_RS21270 | | ATP-dependent RNA helicase RhlB | low | > 75 |
| Dickeya dianthicola 67-19 | 0.32 | HGI48_RS00425 | | two-component system response regulator VfmH | 0.51 | HGI48_RS20225 | | ATP-dependent RNA helicase RhlB | low | > 71 |
| Escherichia coli ECRC98 | 0.32 | JDDGAC_16945 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.52 | JDDGAC_18220 | rhlB | ATP-dependent RNA helicase RhlB | low | > 86 |
| Escherichia coli ECRC100 | 0.32 | OKFHMN_13320 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.52 | OKFHMN_14600 | rhlB | ATP-dependent RNA helicase RhlB | low | > 80 |
| Enterobacter sp. TBS_079 | 0.32 | MPMX20_03423 | | Transcriptional regulatory protein QseF | 0.52 | MPMX20_04492 | | ATP-dependent RNA helicase RhlB | low | > 85 |
| Shewanella loihica PV-4 | 0.31 | Shew_2341 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | 0.54 | Shew_0339 | | ATP-dependent RNA helicase RhlB (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.31 | CSW01_09635 | | sigma-54-dependent Fis family transcriptional regulator | 0.53 | CSW01_01555 | | ATP-dependent RNA helicase RhlB | low | > 62 |
| Enterobacter asburiae PDN3 | 0.31 | EX28DRAFT_0096 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | 0.53 | EX28DRAFT_4451 | | Superfamily II DNA and RNA helicases | low | > 76 |
| Rahnella sp. WP5 | 0.31 | EX31_RS20615 | | two-component system response regulator GlrR | 0.50 | EX31_RS15040 | | ATP-dependent RNA helicase RhlB | low | > 89 |
| Shewanella amazonensis SB2B | 0.31 | Sama_2213 | | response regulator receiver protein (RefSeq) | 0.52 | Sama_3215 | | ATP-dependent RNA helicase RhlB (RefSeq) | low | > 62 |
| Serratia liquefaciens MT49 | 0.31 | IAI46_19460 | | two-component system response regulator GlrR | 0.50 | IAI46_00575 | | ATP-dependent RNA helicase RhlB | low | > 86 |
| Acinetobacter radioresistens SK82 | 0.31 | MPMX26_01292 | | DNA-binding transcriptional regulator NtrC | 0.34 | MPMX26_01113 | | ATP-dependent RNA helicase RhlB | low | > 36 |
| Pseudomonas sp. S08-1 | 0.31 | OH686_12145 | | Alginate biosynthesis two-component system response regulator AlgB | 0.35 | OH686_17780 | | ATP-dependent RNA helicase RhlB | low | > 80 |
| Pantoea sp. MT58 | 0.30 | IAI47_04945 | | two-component system response regulator GlrR | 0.52 | IAI47_18535 | | ATP-dependent RNA helicase RhlB | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.30 | HER17_RS05925 | | two-component system response regulator GlrR | 0.50 | HER17_RS01130 | | ATP-dependent RNA helicase RhlB | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.30 | LU632_RS17930 | glrR | two-component system response regulator GlrR | 0.51 | LU632_RS24265 | rhlB | ATP-dependent RNA helicase RhlB | low | > 74 |
| Shewanella sp. ANA-3 | 0.29 | Shewana3_2016 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | 0.53 | Shewana3_0410 | | ATP-dependent RNA helicase RhlB (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.29 | SO3230 | flrC | flagellar regulatory protein C (NCBI ptt file) | 0.53 | SO0407 | | ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) | low | > 76 |
Not shown: 39 genomes with orthologs for B158DRAFT_0521 only; 1 genomes with orthologs for B158DRAFT_0413 only