Conservation of cofitness between Atu0977 and Atu0978 in Agrobacterium fabrum C58

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0977 serine protease DO-like protease 1.0 Atu0978 two component response regulator 0.49 11
Rhizobium sp. OAE497 0.67 ABIE40_RS05695 Do family serine endopeptidase 0.85 ABIE40_RS05700 response regulator transcription factor low > 107
Sinorhizobium meliloti 1021 0.67 SMc02365 protease precursor protein 0.81 SMc02366 transcriptional regulator 0.91 2
Rhodopseudomonas palustris CGA009 0.41 TX73_009940 Do family serine endopeptidase 0.68 TX73_009945 response regulator transcription factor low > 86
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_02846 DegP/HtrA-family serine protease 0.55 CCNA_02845 two-component response regulator low > 67
Caulobacter crescentus NA1000 0.31 CCNA_02846 DegP/HtrA-family serine protease 0.55 CCNA_02845 two-component response regulator low > 66
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU1468 htrA peptidase/PDZ domain protein (TIGR) 0.28 DVU2588 trcR DNA-binding response regulator (TIGR) low > 55
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS10815 Do family serine endopeptidase 0.54 A4249_RS10810 response regulator transcription factor low > 48
Variovorax sp. SCN45 0.28 GFF3866 HtrA protease/chaperone protein 0.44 GFF2474 Two-component transcriptional response regulator SMc02366, LuxR family low > 127
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS07170 DegQ family serine endoprotease 0.46 ABZR86_RS12570 response regulator transcription factor low > 74
Enterobacter sp. TBS_079 0.27 MPMX20_00847 Periplasmic serine endoprotease DegP 0.42 MPMX20_02319 Transcriptional regulatory protein CusR low > 85
Enterobacter asburiae PDN3 0.27 EX28DRAFT_3750 periplasmic serine protease, Do/DeqQ family 0.41 EX28DRAFT_1165 heavy metal response regulator low > 76
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_07890 Periplasmic serine endoprotease DegP-like 0.46 OKGIIK_04905 DNA-binding response regulator low > 52
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF3342 HtrA protease/chaperone protein 0.45 GFF1757 response regulator in two-component regulatory system with PhoQ — —
Dickeya dianthicola 67-19 0.26 HGI48_RS16000 serine endoprotease DegP 0.42 HGI48_RS03485 heavy metal response regulator transcription factor low > 71
Lysobacter sp. OAE881 0.26 ABIE51_RS13880 DegQ family serine endoprotease 0.53 ABIE51_RS04165 response regulator transcription factor low > 62
Dickeya dianthicola ME23 0.26 DZA65_RS17085 serine endoprotease DegP 0.42 DZA65_RS03595 copper/silver response regulator transcription factor SilR low > 75
Shewanella amazonensis SB2B 0.25 Sama_3073 serine protease (RefSeq) 0.44 Sama_3534 response regulator receiver protein (RefSeq) — —
Shewanella loihica PV-4 0.25 Shew_3296 protease Do (RefSeq) 0.47 Shew_0097 two component transcriptional regulator (RefSeq) 0.74 1
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_08245 deoxyribonuclease HsdR 0.38 CA264_02615 DNA-binding response regulator low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_0558 periplasmic serine protease, Do/DeqQ family 0.35 Echvi_2622 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 79
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS16415 Do family serine endopeptidase 0.38 HMPREF1078_RS01665 response regulator transcription factor low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.21 CA265_RS23030 serine protease 0.36 CA265_RS03060 DNA-binding response regulator 0.39 52
Mucilaginibacter yixingensis YX-36 DSM 26809 0.21 ABZR88_RS21675 Do family serine endopeptidase 0.35 ABZR88_RS15000 response regulator transcription factor low > 71

Not shown: 55 genomes with orthologs for Atu0977 only; 13 genomes with orthologs for Atu0978 only