Conservation of cofitness between Atu2555 and Atu0876 in Agrobacterium fabrum C58

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2555 L-lysine 2,3-aminomutase 1.0 Atu0876 superoxide dismutase 0.39 8
Rhizobium sp. OAE497 0.69 ABIE40_RS18550 lysine-2,3-aminomutase-like protein 0.92 ABIE40_RS22300 superoxide dismutase low > 107
Sinorhizobium meliloti 1021 0.67 SMc00355 hypothetical protein 0.88 SMc00043 superoxide dismutase Fe protein
Rhodopseudomonas palustris CGA009 0.57 TX73_012995 lysine-2,3-aminomutase-like protein 0.76 TX73_008710 superoxide dismutase
Bosea sp. OAE506 0.53 ABIE41_RS00075 lysine-2,3-aminomutase-like protein 0.69 ABIE41_RS22480 superoxide dismutase low > 77
Azospirillum sp. SherDot2 0.53 MPMX19_00061 L-lysine 2,3-aminomutase 0.56 MPMX19_01161 Superoxide dismutase [Fe]
Azospirillum brasilense Sp245 0.53 AZOBR_RS01360 lysine 2 3-aminomutase 0.57 AZOBR_RS15415 superoxide dismutase
Magnetospirillum magneticum AMB-1 0.48 AMB_RS06530 lysine-2,3-aminomutase-like protein 0.49 AMB_RS12630 superoxide dismutase
Rhodospirillum rubrum S1H 0.47 Rru_A0224 Protein of unknown function DUF160 (NCBI) 0.49 Rru_A1760 Superoxide dismutase (NCBI)
Acinetobacter radioresistens SK82 0.26 MPMX26_01066 L-lysine 2,3-aminomutase 0.51 MPMX26_00996 Superoxide dismutase [Fe]
Escherichia coli ECRC101 0.25 OKFHMN_12395 epmB EF-P beta-lysylation protein EpmB 0.45 OKFHMN_27405 sodB superoxide dismutase [Fe]
Escherichia coli ECRC101 0.25 MCAODC_02905 epmB EF-P beta-lysylation protein EpmB 0.45 MCAODC_18005 sodB superoxide dismutase [Fe]
Erwinia tracheiphila SCR3 0.25 LU632_RS01880 epmB EF-P beta-lysylation protein EpmB 0.41 LU632_RS00125 sodA superoxide dismutase [Mn]
Escherichia coli ECRC99 0.25 KEDOAH_15770 epmB EF-P beta-lysylation protein EpmB 0.45 KEDOAH_00705 sodB superoxide dismutase [Fe]
Escherichia coli ECRC98 0.25 JDDGAC_16030 epmB EF-P beta-lysylation protein EpmB 0.45 JDDGAC_01995 sodB superoxide dismutase [Fe]
Enterobacter asburiae PDN3 0.25 EX28DRAFT_3342 EF-P beta-lysylation protein EpmB 0.45 EX28DRAFT_1653 Superoxide dismutase
Escherichia coli ECRC102 0.25 NIAGMN_10240 epmB EF-P beta-lysylation protein EpmB 0.45 NIAGMN_00660 sodB superoxide dismutase [Fe]
Escherichia fergusonii Becca 0.25 EFB2_04389 L-lysine 2,3-aminomutase 0.45 EFB2_02337 Superoxide dismutase [Fe] low > 86
Escherichia coli Nissle 1917 0.25 ECOLIN_RS24080 EF-P beta-lysylation protein EpmB 0.45 ECOLIN_RS09230 superoxide dismutase [Fe]
Escherichia coli ECOR38 0.25 HEPCGN_10620 epmB EF-P beta-lysylation protein EpmB 0.45 HEPCGN_05790 sodB superoxide dismutase [Fe] low > 85
Escherichia coli ECOR27 0.25 NOLOHH_04655 epmB EF-P beta-lysylation protein EpmB 0.45 NOLOHH_17925 sodB superoxide dismutase [Fe]
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_03896 L-lysine 2,3-aminomutase 0.45 OHPLBJKB_02069 Superoxide dismutase [Fe] low > 73
Escherichia coli BW25113 0.25 b4146 yjeK predicted lysine aminomutase (NCBI) 0.45 b1656 sodB superoxide dismutase, Fe (NCBI) low > 76
Escherichia coli BL21 0.25 ECD_04016 EF-P-Lys34 lysylation protein; weak lysine 2,3-aminomutase 0.45 ECD_01626 superoxide dismutase, Fe
Escherichia coli ECRC62 0.25 BNILDI_06835 epmB EF-P beta-lysylation protein EpmB 0.45 BNILDI_16715 sodB superoxide dismutase [Fe]
Alteromonas macleodii MIT1002 0.24 MIT1002_00681 L-lysine 2,3-aminomutase 0.41 MIT1002_01234 Superoxide dismutase [Fe]
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF2006 Lysyl-lysine 2,3-aminomutase 0.46 GFF3619 Superoxide dismutase [Fe] (EC 1.15.1.1)
Lysobacter sp. OAE881 0.24 ABIE51_RS13505 EF-P beta-lysylation protein EpmB 0.45 ABIE51_RS15385 Fe-Mn family superoxide dismutase
Pantoea sp. MT58 0.24 IAI47_17295 EF-P beta-lysylation protein EpmB 0.40 IAI47_18725 superoxide dismutase [Mn]
Dickeya dadantii 3937 0.24 DDA3937_RS19000 EF-P beta-lysylation protein EpmB 0.41 DDA3937_RS20960 superoxide dismutase [Mn]
Rahnella sp. WP5 0.24 EX31_RS08940 EF-P beta-lysylation protein EpmB 0.42 EX31_RS05785 superoxide dismutase [Mn]
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.2285.1 Lysyl-lysine 2,3-aminomutase 0.44 Xcc-8004.2280.1 Manganese superoxide dismutase (EC 1.15.1.1)
Dickeya dianthicola ME23 0.24 DZA65_RS20210 EF-P beta-lysylation protein EpmB 0.39 DZA65_RS00285 superoxide dismutase [Mn]
Pectobacterium carotovorum WPP14 0.23 HER17_RS02350 EF-P beta-lysylation protein EpmB 0.42 HER17_RS21110 superoxide dismutase [Mn]
Marinobacter adhaerens HP15 0.23 HP15_2514 lysine 2,3-aminomutase YodO family protein 0.43 HP15_2351 superoxide dismutase, Fe
Dickeya dianthicola 67-19 0.23 HGI48_RS19090 EF-P beta-lysylation protein EpmB 0.40 HGI48_RS00285 superoxide dismutase [Mn]
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_13450 EF-P beta-lysylation protein EpmB 0.43 CSW01_10230 superoxide dismutase [Fe]

Not shown: 6 genomes with orthologs for Atu2555 only; 40 genomes with orthologs for Atu0876 only