Conservation of cofitness between AO356_15650 and AO356_05540 in Pseudomonas fluorescens FW300-N2C3

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2C3 1.0 AO356_15650 50S rRNA methyltransferase 1.0 AO356_05540 cold-shock protein 0.30 13
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_5071 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 1.00 Pf6N2E2_2967 Cold shock protein CspA 0.29 2
Pseudomonas sp. RS175 0.91 PFR28_03798 Ribosomal RNA large subunit methyltransferase G 0.99 PFR28_00498 Cold shock protein CapB low > 88
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_1438 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 1.00 PfGW456L13_4642 Cold shock protein CspA low > 87
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_2763 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 1.00 Pf1N1B4_3171 Cold shock protein CspA
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_13950 50S rRNA methyltransferase 1.00 AO353_16935 cold-shock protein
Pseudomonas simiae WCS417 0.85 PS417_24335 50S rRNA methyltransferase 1.00 PS417_06370 cold-shock protein low > 88
Pseudomonas fluorescens SBW25 0.84 PFLU_RS26260 class I SAM-dependent methyltransferase 1.00 PFLU_RS06435 cold-shock protein
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS26260 class I SAM-dependent methyltransferase 1.00 PFLU_RS06435 cold-shock protein
Pseudomonas putida KT2440 0.80 PP_4648 Ribosomal RNA large subunit methyltransferase G 0.92 PP_1099 Cold shock protein CapB low > 96
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase 1.00 Psyr_3884 cold-shock DNA-binding protein family
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase 1.00 Psyr_3884 cold-shock DNA-binding protein family
Pseudomonas stutzeri RCH2 0.72 Psest_3440 16S RNA G1207 methylase RsmC 0.98 Psest_3045 Cold shock proteins low > 67
Pectobacterium carotovorum WPP14 0.35 HER17_RS18680 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.58 HER17_RS15290 transcription antiterminator/RNA stability regulator CspE low > 75
Dickeya dadantii 3937 0.33 DDA3937_RS02850 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.64 DDA3937_RS19755 cold-shock protein low > 74
Shewanella amazonensis SB2B 0.33 Sama_2548 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) 0.66 Sama_1970 cold-shock DNA-binding domain-containing protein (RefSeq)
Dickeya dianthicola ME23 0.33 DZA65_RS03000 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.64 DZA65_RS20940 cold-shock protein low > 75
Dickeya dianthicola 67-19 0.33 HGI48_RS02825 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.64 HGI48_RS19865 cold-shock protein
Shewanella oneidensis MR-1 0.30 SO1097 conserved hypothetical protein (NCBI ptt file) 0.67 SO2787 cold shock domain family protein (NCBI ptt file)
Shewanella sp. ANA-3 0.30 Shewana3_0932 methyltransferase small (RefSeq) 0.67 Shewana3_2569 cold-shock DNA-binding protein family protein (RefSeq)
Shewanella loihica PV-4 0.28 Shew_2886 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) 0.66 Shew_1614 cold-shock DNA-binding domain-containing protein (RefSeq)

Not shown: 25 genomes with orthologs for AO356_15650 only; 1 genomes with orthologs for AO356_05540 only